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scnpilot_cont_500_p_scaffold_2374

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2374_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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176..1936
DNA (1761bp) protein (587aa)
Integrase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH6_PSEUX
integrase protein
Integrase family protein {ECO:0000313|EMBL:AEA26550.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_2374_2
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1955..2632)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L919_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW10842.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
scnpilot_cont_500_p_scaffold_2374_3
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2637..3848)
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J809_FRASC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA00239.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
scnpilot_cont_500_p_scaffold_2374_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4015..4329
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003728CC7
excisionase
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:AEA26546.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
scnpilot_cont_500_p_scaffold_2374_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4326..4547
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26545.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2374_6
Streptomyces sp. FR1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4544..5122
DNA (579bp) protein (193aa)
UPI0003D7AC67 related cluster n=1 Tax=unknown RepID=UPI0003D7AC67
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=349971 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. FR1.;"
transcription factor WhiB family protein
scnpilot_cont_500_p_scaffold_2374_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5123..5563
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26544.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2374_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5560..7611
DNA (2052bp) protein (684aa)
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXG8_PSEUX
type IV secretory pathway VirD4 protein-like protein
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:AEA26542.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
scnpilot_cont_500_p_scaffold_2374_9
unknown

Not on your lists

7608..8792
DNA (1185bp) protein (395aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2374_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8789..9451
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDCCB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26541.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2374_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9448..10311
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDCCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26539.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_2374_12
unknown

Not on your lists

10308..10577
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2374_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10571..13738
DNA (3168bp) protein (1056aa)
TrwC relaxase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDCCE
TrwC relaxase
TrwC relaxase {ECO:0000313|EMBL:AEA22317.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
Displaying 13 items

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