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scnpilot_cont_500_p_scaffold_2425

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2425_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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106..948
DNA (843bp) protein (281aa)
Polysaccharide deacetylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSP5_PSEUX
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEA24117.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
scnpilot_cont_500_p_scaffold_2425_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(971..2089)
DNA (1119bp) protein (373aa)
cystathionine gamma-lyase (EC:4.4.1.1)
Cystathionine gamma-lyase {ECO:0000313|EMBL:AEA24074.1}; EC=4.4.1.1 {ECO:0000313|EMBL:AEA24074.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
Cystathionine gamma-lyase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR16_PSEUX rbh
scnpilot_cont_500_p_scaffold_2425_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2197..3207)
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR15_PSEUX rbh
glycerol-3-phosphate dehydrogenase
scnpilot_cont_500_p_scaffold_2425_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3204..3932)
DNA (729bp) protein (243aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR14_PSEUX rbh
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEA24072.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
scnpilot_cont_500_p_scaffold_2425_5
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4316..4951
DNA (636bp) protein (212aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=144997
hypothetical protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE0FD
hypothetical protein
scnpilot_cont_500_p_scaffold_2425_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5015..7408
DNA (2394bp) protein (798aa)
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR12_PSEUX rbh
scnpilot_cont_500_p_scaffold_2425_7
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7405..8331
DNA (927bp) protein (309aa)
NUDIX hydrolase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026269C1 rbh
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AIJ21621.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_2425_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8568..9179)
DNA (612bp) protein (204aa)
Histone family protein DNA-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR10_PSEUX
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:AEA24068.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_2425_9
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9296..9889)
DNA (594bp) protein (198aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
isopropylmalate isomerase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEB84 rbh
leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
scnpilot_cont_500_p_scaffold_2425_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9889..11319)
DNA (1431bp) protein (477aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR08_PSEUX rbh
3-isopropylmalate dehydratase large subunit
scnpilot_cont_500_p_scaffold_2425_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11413..12069
DNA (657bp) protein (219aa)
Transcriptional regulator, IclR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR07_PSEUX rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEA24065.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_2425_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12194..13549
DNA (1356bp) protein (452aa)
Heat shock protein 70 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR06_PSEUX
molecular chaperone DnaK
Heat shock protein 70 {ECO:0000313|EMBL:AEA24064.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (stra
Displaying 12 items

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