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scnpilot_cont_500_p_scaffold_2565

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2565_1
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..294
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036B662E
Uncharacterized protein {ECO:0000313|EMBL:EYR64593.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2565_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

334..615
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24618.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2565_3
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

650..973
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6RA13_NOCCG
Membrane protein {ECO:0000313|EMBL:EYU71047.1}; TaxID=1460244 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_2565_4
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1003..1449
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S0S4_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL45782.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
scnpilot_cont_500_p_scaffold_2565_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1446..1736
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VS39_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ38486.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
scnpilot_cont_500_p_scaffold_2565_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1954..2823
DNA (870bp) protein (290aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0S5_PSEUX rbh
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEA25777.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_2565_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2895..3419
DNA (525bp) protein (175aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ9_PSEUX
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:AEA24619.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseud
scnpilot_cont_500_p_scaffold_2565_8
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3619..3846)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TA80_AMYOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM07782.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB100
scnpilot_cont_500_p_scaffold_2565_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3865..4872)
DNA (1008bp) protein (336aa)
Inosose isomerase {ECO:0000313|EMBL:EWC58780.1}; EC=5.3.99.- {ECO:0000313|EMBL:EWC58780.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;"
Putative sugar phosphate isomerase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RUV0_BLASD rbh
putative sugar phosphate isomerase rbh
scnpilot_cont_500_p_scaffold_2565_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4872..6041)
DNA (1170bp) protein (390aa)
Oxidoreductase domain-containing protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FGR1_9PSEU rbh
Oxidoreductase {ECO:0000313|EMBL:EWC58779.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
oxidoreductase domain-containing protein
scnpilot_cont_500_p_scaffold_2565_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6038..7084)
DNA (1047bp) protein (349aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037B2F33 rbh
Ribose ABC transporter, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:EWC58778.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;
monosaccharide-binding protein rbh
scnpilot_cont_500_p_scaffold_2565_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7113..8144)
DNA (1032bp) protein (344aa)
Ribose ABC transporter (Permease) n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYX0_STRRD rbh
ABC transporter integral membrane protein {ECO:0000313|EMBL:EWC58777.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineos
ribose ABC transporter permease rbh
scnpilot_cont_500_p_scaffold_2565_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8137..9660)
DNA (1524bp) protein (508aa)
ABC transporter related protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H7B1_CELFA rbh
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:EWC58776.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="
ABC transporter-like protein
scnpilot_cont_500_p_scaffold_2565_14
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9736..10950
DNA (1215bp) protein (405aa)
ROK family transcriptional regulator n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WVL2_9ACTO rbh
Transcriptional regulator, ROK family protein {ECO:0000313|EMBL:EWC58775.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinoki
ROK domain-containing protein
scnpilot_cont_500_p_scaffold_2565_15
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10967..12160)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JY64_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31071.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
scnpilot_cont_500_p_scaffold_2565_16
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12295..13149)
DNA (855bp) protein (285aa)
gluconolactonase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002625609 rbh
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AIJ22690.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis meth
scnpilot_cont_500_p_scaffold_2565_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13293..14258
DNA (966bp) protein (322aa)
Ribonuclease BN n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSU4_PSEUX rbh
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:AEA24547.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
scnpilot_cont_500_p_scaffold_2565_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14371..15720)
DNA (1350bp) protein (450aa)
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=675635 species="Bacteria;
phenylacetate-CoA ligase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE879 rbh
Displaying 18 items

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