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scnpilot_cont_500_p_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_135_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(190..1071)
DNA (882bp) protein (294aa)
Phospholipase/Carboxylesterase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1R8_PSEUX
phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:AEA27978.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_135_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1221..1766
DNA (546bp) protein (182aa)
OmpA/MotB domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYV7_PSEUX
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEA27682.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_135_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1777..2181
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYV6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27681.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_135_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2239..3297)
DNA (1059bp) protein (353aa)
2-oxoglutarate synthase (EC:1.2.7.3)
2-oxoglutarate synthase {ECO:0000313|EMBL:AEA27680.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AEA27680.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD5B rbh
scnpilot_cont_500_p_scaffold_135_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3294..5174)
DNA (1881bp) protein (627aa)
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:AEA27679.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AEA27679.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonoca
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYV4_PSEUX rbh
scnpilot_cont_500_p_scaffold_135_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5306..6058)
DNA (753bp) protein (251aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYV3_PSEUX rbh
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA27678.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_135_7
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6105..6887)
DNA (783bp) protein (261aa)
Methyltransferase domain protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KIC8_9ACTO rbh
Methyltransferase domain protein {ECO:0000313|EMBL:EKX60163.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03
hypothetical protein
scnpilot_cont_500_p_scaffold_135_8
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6884..7483)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00038019D2
Uncharacterized protein {ECO:0000313|EMBL:KDN81719.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_135_9
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7578..9029
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036346EB rbh
Amino acid transporter {ECO:0000313|EMBL:EJL28174.1}; Flags: Precursor;; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp.
permease
scnpilot_cont_500_p_scaffold_135_10
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9026..10312
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003628E07 rbh
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ADI06394.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (s
scnpilot_cont_500_p_scaffold_135_11
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10309..11310
DNA (1002bp) protein (334aa)
Putative D-threonine aldolase {ECO:0000313|EMBL:CCM66005.1}; EC=4.1.2.42 {ECO:0000313|EMBL:CCM66005.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Mi
metal-activated pyridoxal enzyme n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDF66 rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_135_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11348..12199
DNA (852bp) protein (284aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonoc
Protease HtpX homolog n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYV1_PSEUX rbh
protease htpX
scnpilot_cont_500_p_scaffold_135_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12236..13066
DNA (831bp) protein (277aa)
Transcriptional regulator, AraC family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYU6_PSEUX rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEA27671.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_135_14
unknown

Not on your lists

13135..13332
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_135_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13493..13984)
DNA (492bp) protein (164aa)
UPF0234 protein Psed_5535 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYU0_PSEUX
hypothetical protein
UPF0234 protein Psed_5535 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_135_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14257..14499)
DNA (243bp) protein (81aa)
Integrase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYT9_PSEUX
integrase protein
Integrase family protein {ECO:0000313|EMBL:AEA27664.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_135_17
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14496..14882)
DNA (387bp) protein (129aa)
glyoxalase n=1 Tax=Streptomyces prunicolor RepID=UPI00037E8D9C
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EFL08123.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptom
hypothetical protein
scnpilot_cont_500_p_scaffold_135_18
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15614..16072)
DNA (459bp) protein (153aa)
rnhA; Ribonuclease H (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XIA1_9PSEU
scnpilot_cont_500_p_scaffold_135_19
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16065..16811)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Streptomyces purpureus RepID=UPI000371FF82 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIL38812.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
HemK family modification methylase
scnpilot_cont_500_p_scaffold_135_20
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16808..17047)
DNA (240bp) protein (80aa)
Possible transcriptional regulator, MarR family {ECO:0000313|EMBL:ABH00748.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus josti
scnpilot_cont_500_p_scaffold_135_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17344..18291)
DNA (948bp) protein (316aa)
Patatin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXN1_PSEUX rbh
patatin
Patatin {ECO:0000313|EMBL:AEA27614.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486
scnpilot_cont_500_p_scaffold_135_22
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18299..18820)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036DD5BF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL89346.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
scnpilot_cont_500_p_scaffold_135_23
unknown

Not on your lists

comp(18829..19113)
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_135_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19271..20503
DNA (1233bp) protein (411aa)
beta-lactamase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD70 rbh
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEA27612.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_135_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20503..20898
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXM8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27611.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_135_26
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20849..21793)
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI0003602623 rbh
LysR family transcriptional regulator rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:AEW99613.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya
scnpilot_cont_500_p_scaffold_135_27
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21898..23109
DNA (1212bp) protein (404aa)
major facilitator transporter n=1 Tax=Nocardiopsis gilva RepID=UPI00034574A8 rbh
transmembrane efflux protein rbh
Major facilitator transporter {ECO:0000313|EMBL:EQD82839.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora eryt
scnpilot_cont_500_p_scaffold_135_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23082..23750)
DNA (669bp) protein (223aa)
TenA family transcriptional activator (EC:3.5.99.2)
Transcriptional activator, TenA family {ECO:0000313|EMBL:AEA27610.1}; EC=3.5.99.2 {ECO:0000313|EMBL:AEA27610.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
Transcriptional activator, TenA family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXM7_PSEUX rbh
scnpilot_cont_500_p_scaffold_135_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24089..24304
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXM6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27609.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_135_30
unknown

Not on your lists

comp(24314..24529)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying items 1-30 of 155 in total

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