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scnpilot_cont_500_p_scaffold_242

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_242_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..135)
DNA (135bp) protein (45aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L774_PSEUX
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:AEA29047.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
scnpilot_cont_500_p_scaffold_242_2
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(677..1570)
DNA (894bp) protein (298aa)
Universal stress protein UspA-like protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1P6_9PSEU
Universal stress protein UspA-like protein {ECO:0000313|EMBL:EHR50909.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomo
Universal stress protein family
scnpilot_cont_500_p_scaffold_242_3
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1570..2220)
DNA (651bp) protein (217aa)
CBS-domain-containing membrane protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X2P1_9PSEU
CBS-domain-containing membrane protein {ECO:0000313|EMBL:EHR50980.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonosp
Hypothetical protein
scnpilot_cont_500_p_scaffold_242_4
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2330..2773
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262791E
Uncharacterized protein {ECO:0000313|EMBL:KIF71527.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_242_5
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2840..3577
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003817A8A
Uncharacterized protein {ECO:0000313|EMBL:KIF78194.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
Hypothetical protein
scnpilot_cont_500_p_scaffold_242_6
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3577..4356
DNA (780bp) protein (260aa)
Two-component system response regulator n=3 Tax=Amycolatopsis mediterranei RepID=D8I666_AMYMU
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:AEK44167.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis med
scnpilot_cont_500_p_scaffold_242_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4353..5366)
DNA (1014bp) protein (338aa)
aldo/keto reductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6F1 rbh
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AEA25170.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_242_8
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(5392..7287)
DNA (1896bp) protein (632aa)
NemA3; NADH:flavin oxidoreductase Tax=RBG_13_Chloroflexi_53_26_curated
NADH:flavin oxidoreductase/NADH oxidase id=4728897 bin=GWC2_Methylomirabilis_70_16 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
NADH:flavin oxidoreductase
scnpilot_cont_500_p_scaffold_242_9
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7284..7475)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00036923E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ62040.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
scnpilot_cont_500_p_scaffold_242_10
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7486..8694)
DNA (1209bp) protein (403aa)
cytochrome P450 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE675
Uncharacterized protein {ECO:0000313|EMBL:KBZ61015.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
cytochrome P450
scnpilot_cont_500_p_scaffold_242_11
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8691..9500)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036B6744
Uncharacterized protein {ECO:0000313|EMBL:GAM97761.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
scnpilot_cont_500_p_scaffold_242_12
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9500..10264)
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAM97760.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAM97760.1};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJJ7_DESK7
scnpilot_cont_500_p_scaffold_242_13
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10261..11793)
DNA (1533bp) protein (511aa)
Acetyl-coenzyme A carboxyl transferase alpha chain {ECO:0000313|EMBL:GAM97759.1}; EC=6.4.1.2 {ECO:0000313|EMBL:GAM97759.1};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" sou
Propionyl-CoA carboxylase id=4153737 bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
carboxyl transferase
scnpilot_cont_500_p_scaffold_242_14
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11906..13636
DNA (1731bp) protein (577aa)
Biotin carboxylase of acetyl-CoA carboxylase {ECO:0000313|EMBL:GAM97763.1}; EC=6.3.4.14 {ECO:0000313|EMBL:GAM97763.1};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="
Carbamoyl-phosphate synthase L chain, ATP-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT87_RUBXD
carbamoyl-phosphate synthase L chain, ATP-binding protein
scnpilot_cont_500_p_scaffold_242_15
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13740..14390)
DNA (651bp) protein (217aa)
TetR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDW0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KBZ61027.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_242_16
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14422..15255)
DNA (834bp) protein (278aa)
3-ketoacyl-ACP reductase n=1 Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI000361FEE0 rbh
Short-chain dehydrogenase/reductase (SDR) {ECO:0000313|EMBL:EME57002.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS
limC; Short-chain dehydrogenase/reductase (SDR)
scnpilot_cont_500_p_scaffold_242_17
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15499..17058)
DNA (1560bp) protein (520aa)
fadB; long-chain-fatty-acid-CoA ligase (EC:6.2.1.3)
Linear gramicidin synthase subunit C n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DJQ6_9NOCA rbh
Linear gramicidin synthase subunit C {ECO:0000313|EMBL:CCQ14881.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
scnpilot_cont_500_p_scaffold_242_18
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17073..17486)
DNA (414bp) protein (138aa)
Predicted aromatic ring hydroxylating dioxygenase beta subunit n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DE56_9NOCA
Predicted aromatic ring hydroxylating dioxygenase beta subunit {ECO:0000313|EMBL:CCQ14880.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="R
aromatic ring hydroxylating dioxygenase subunt beta
scnpilot_cont_500_p_scaffold_242_19
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17489..18706)
DNA (1218bp) protein (406aa)
Cytochrome P450 {ECO:0000313|EMBL:KID29913.1}; EC=1.14.15.13 {ECO:0000313|EMBL:KID29913.1};; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" sour
Cytochrome P450 n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=G8WZY1_STREN rbh
cypX; cytochrome P450 cypX rbh
scnpilot_cont_500_p_scaffold_242_20
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18774..19889)
DNA (1116bp) protein (372aa)
Luciferase-like, subgroup n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCL1_INTC7 rbh
Luciferase-like, subgroup
Luciferase-like, subgroup {ECO:0000313|EMBL:ADU49615.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain AT
scnpilot_cont_500_p_scaffold_242_21
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19889..21271)
DNA (1383bp) protein (461aa)
Amine oxidase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FM03_DESAA
amine oxidase
Tax=BJP_IG2102_Syntrophobacterales_60_12
scnpilot_cont_500_p_scaffold_242_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21268..22053)
DNA (786bp) protein (262aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA24793.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA24793.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ89_PSEUX
scnpilot_cont_500_p_scaffold_242_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22050..23054)
DNA (1005bp) protein (335aa)
Putative luciferase-like monooxygenase id=3842153 bin=GWF2_Methylomirabilis_70_14 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative luciferase-like monooxygenase Tax=GWA2_Rokubacteria_70_23_curated
luciferase-like monooxygenase
scnpilot_cont_500_p_scaffold_242_24
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23102..24679
DNA (1578bp) protein (526aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=1 Tax=Gordonia sp. KTR9 RepID=J9SBP2_9ACTO rbh
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:AFR50946.1}; TaxID=337191 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp.
scnpilot_cont_500_p_scaffold_242_25
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24671..25072)
DNA (402bp) protein (134aa)
MaoC-like dehydratase n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DDW6_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KBZ61016.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
hypothetical protein
scnpilot_cont_500_p_scaffold_242_26
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25069..25485)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0KAB4_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHK82469.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora a
scnpilot_cont_500_p_scaffold_242_27
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25566..27179
DNA (1614bp) protein (538aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=1 Tax=Gordonia sp. KTR9 RepID=J9SBP2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KBZ61021.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
scnpilot_cont_500_p_scaffold_242_28
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27139..28689)
DNA (1551bp) protein (517aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=1 Tax=Gordonia sp. KTR9 RepID=J9SBP2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KBZ61021.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
scnpilot_cont_500_p_scaffold_242_29
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28704..29825)
DNA (1122bp) protein (374aa)
Putative long-chain-acyl-CoA dehydrogenase n=1 Tax=Mycobacterium abscessus subsp. bolletii CCUG 48898 = JCM 15300 RepID=H0I758_MYCAB
isovaleryl-CoA dehydrogenase
Putative long-chain-acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHM22076.1}; TaxID=1091046 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;
scnpilot_cont_500_p_scaffold_242_30
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29837..30703)
DNA (867bp) protein (289aa)
Putative 3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L8D7_9ACTO
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EZP78148.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus N
3-hydroxybutyryl-coA dehydrogenase
Displaying items 1-30 of 57 in total

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