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scnpilot_cont_500_p_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_255_1
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(140..571)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Streptomyces viridosporus RepID=UPI00030CDE0C
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:CDO30870.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobact
hypothetical protein
scnpilot_cont_500_p_scaffold_255_2

Not on your lists

comp(568..1731)
DNA (1164bp) protein (388aa)
Thiolase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CB25_MYCTH rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL83892.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thiolase
scnpilot_cont_500_p_scaffold_255_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1736..3397)
DNA (1662bp) protein (554aa)
AMP-dependent synthetase and ligase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPQ8_NOCSJ
cyclohexanecarboxylate-CoA ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABL83793.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strai
scnpilot_cont_500_p_scaffold_255_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3468..4322)
DNA (855bp) protein (285aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J921_FRASU
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADP80900.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_255_5
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4319..4894)
DNA (576bp) protein (192aa)
Regulatory protein TetR n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGQ0_THEM7
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:ADU50596.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Ther
scnpilot_cont_500_p_scaffold_255_6
unknown

Not on your lists

5185..5931
DNA (747bp) protein (249aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_255_7
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6070..7107)
DNA (1038bp) protein (346aa)
Alpha/beta hydrolase fold protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B340_FRADG
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEH09950.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;
scnpilot_cont_500_p_scaffold_255_8
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7104..7544)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MGL6_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO90161.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. R
scnpilot_cont_500_p_scaffold_255_9
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7680..8831
DNA (1152bp) protein (384aa)
Uncharacterized protein {ECO:0000313|EMBL:GAF49529.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.
Propanoyl-CoA C-acyltransferase id=4885150 bin=GWC2_Methylomirabilis_70_16 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_255_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8828..10378
DNA (1551bp) protein (517aa)
Citrate synthase id=4840593 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
menE; citrate synthase Tax=GWC2_Rokubacteria_70_16_curated
menE; citrate synthase
scnpilot_cont_500_p_scaffold_255_11
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10437..11177
DNA (741bp) protein (247aa)
Transcriptional regulator n=3 Tax=Rhodococcus RepID=K8XRF0_RHOOP
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:ABG99078.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA
scnpilot_cont_500_p_scaffold_255_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11147..11749)
DNA (603bp) protein (201aa)
TetR family transcriptional regulator n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00037527B5
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EWC58742.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospor
regulatory protein TetR
scnpilot_cont_500_p_scaffold_255_13
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11816..12337
DNA (522bp) protein (174aa)
Uncharacterized protein, possibly involved in aromatic compounds catabolism n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X823_9PSEU
Uncharacterized protein, possibly involved in aromatic compounds catabolism {ECO:0000313|EMBL:EHR53555.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccha
thioesterase
scnpilot_cont_500_p_scaffold_255_14
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12337..13383
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE5A rbh
Uncharacterized protein {ECO:0000313|EMBL:EHR53425.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU1
hypothetical protein
scnpilot_cont_500_p_scaffold_255_15
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13318..14763)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036CBD85
oxidoreductase FAD/NAD(P)-binding subunit
Oxidoreductase FAD/NAD(P)-binding subunit {ECO:0000313|EMBL:CCA92458.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
scnpilot_cont_500_p_scaffold_255_16
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15032..15313)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036D77E6
Uncharacterized protein {ECO:0000313|EMBL:EUA56906.1}; TaxID=1299331 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source=
hypothetical protein
scnpilot_cont_500_p_scaffold_255_17
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15324..15614)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000369AAC2
Uncharacterized protein {ECO:0000313|EMBL:EUA56907.1}; TaxID=1299331 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source=
hypothetical protein
scnpilot_cont_500_p_scaffold_255_18
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15614..16369)
DNA (756bp) protein (252aa)
Putative phenylacetic acid degradation protein paaA n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RL58_FRAAA rbh
phenylacetic acid degradation protein paaA
Putative phenylacetic acid degradation protein paaA {ECO:0000313|EMBL:CAJ61747.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN1
scnpilot_cont_500_p_scaffold_255_19
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16512..16904
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RL50_FRAAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ61755.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
scnpilot_cont_500_p_scaffold_255_20
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16901..17257
DNA (357bp) protein (119aa)
Acyl dehydratase n=1 Tax=Frankia sp. QA3 RepID=I8QNU1_9ACTO
Acyl dehydratase {ECO:0000313|EMBL:EIV91564.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_255_21
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17257..18048
DNA (792bp) protein (264aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase-isomerase, phenylacetic acid degradation {ECO:0000313|EMBL:CAJ61753.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAJ61753.1};; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Fran
Enoyl-CoA hydratase-isomerase, phenylacetic acid degradation n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RL52_FRAAA rbh
scnpilot_cont_500_p_scaffold_255_22
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18057..19430
DNA (1374bp) protein (458aa)
coenzyme A ligase (EC:6.2.1.30)
Putative Coenzyme A ligase {ECO:0000313|EMBL:CAJ61752.1}; EC=6.2.1.30 {ECO:0000313|EMBL:CAJ61752.1};; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Franki
Putative Coenzyme A ligase n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RL53_FRAAA rbh
scnpilot_cont_500_p_scaffold_255_23
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19427..19672
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I8ZX00_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV91561.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_255_24
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19778..20800
DNA (1023bp) protein (341aa)
Aminocarboxymuconate-semialdehyde decarboxylase {ECO:0000313|EMBL:CCW11769.1}; EC=4.1.1.45 {ECO:0000313|EMBL:CCW11769.1};; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiac
aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=Rhodococcus sp. P14 RepID=UPI00029B210C
scnpilot_cont_500_p_scaffold_255_25
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20827..21108
DNA (282bp) protein (94aa)
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45)
aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=Rhodococcus sp. P14 RepID=UPI00029B210C
Aminocarboxymuconate-semialdehyde decarboxylase {ECO:0000313|EMBL:KDE11750.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B
scnpilot_cont_500_p_scaffold_255_26
unknown

Not on your lists

21081..21233
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_255_27
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21294..21692
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000370C781
extradiol ring-cleavage dioxygenase class III protein subunit B
Extradiol ring-cleavage dioxygenase class III protein subunit B {ECO:0000313|EMBL:AEH09456.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbi
scnpilot_cont_500_p_scaffold_255_28
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22392..23099)
DNA (708bp) protein (236aa)
Transcriptional regulator, GntR family protein n=7 Tax=Mycobacterium RepID=H8IKW2_MYCIA
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EUA54384.1}; TaxID=1299331 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium comp
scnpilot_cont_500_p_scaffold_255_29
Mycobacterium fortuitum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23157..24506
DNA (1350bp) protein (450aa)
Nitrilotriacetate monooxygenase component A n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0UKM9_MYCFO rbh
Nitrilotriacetate monooxygenase component A {ECO:0000313|EMBL:EJZ05540.1}; TaxID=1214102 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
nitrilotriacetate monooxygenase component A rbh
scnpilot_cont_500_p_scaffold_255_30
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24533..25315
DNA (783bp) protein (261aa)
Citrate synthase n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CBV6_ALCDB rbh
citrate synthase
Citrate synthase {ECO:0000313|EMBL:AFT69960.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei
Displaying items 1-30 of 118 in total

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