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scnpilot_cont_500_p_scaffold_258

Search features with annotation key words

Displaying items 31-60 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_258_31
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29455..30174
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSF6_BLASD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG05548.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
scnpilot_cont_500_p_scaffold_258_32
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30548..31633)
DNA (1086bp) protein (362aa)
recombination regulator RecX n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE7D7
Regulatory protein recX
Regulatory protein RecX {ECO:0000256|SAAS:SAAS00093789}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_258_33
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(31636..32685)
DNA (1050bp) protein (350aa)
Protein RecA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0F3_PSEUX rbh
recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=675635 species="Bacteria; Actinobac
scnpilot_cont_500_p_scaffold_258_34
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32888..33082)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0F4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26750.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_258_35
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33111..34394
DNA (1284bp) protein (428aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0F5_PSEUX rbh
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:AEA26751.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Ps
scnpilot_cont_500_p_scaffold_258_36
unknown

Not on your lists

34391..34507
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_258_37
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34508..35164)
DNA (657bp) protein (219aa)
cation-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF379
hemerythrin-like protein
Uncharacterized protein {ECO:0000313|EMBL:EID73154.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 132
scnpilot_cont_500_p_scaffold_258_38
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35293..39969
DNA (4677bp) protein (1559aa)
DEAD/H associated domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0F9_PSEUX rbh
DEAD/H associated domain protein {ECO:0000313|EMBL:AEA26755.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
DEAD/H associated domain-containing protein
scnpilot_cont_500_p_scaffold_258_39
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40102..40698
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S7C2_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV87502.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 3104
scnpilot_cont_500_p_scaffold_258_40
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40857..41450)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI0003813DC6
Contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ13457.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.
Transcriptional regulator, TetR
scnpilot_cont_500_p_scaffold_258_41
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41447..42949)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI0003805781 rbh
Long-chain-fatty-acid-CoA ligase
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:AJW38065.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
scnpilot_cont_500_p_scaffold_258_42
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43026..43664)
DNA (639bp) protein (213aa)
Ribonuclease BN n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DHW9_9NOCA rbh
Ribonuclease BN {ECO:0000313|EMBL:CCQ15603.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
nitroreductase rbh
scnpilot_cont_500_p_scaffold_258_43
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43777..45684
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI0003633F4C rbh
Cyclohexanone monooxygenase rbh
Cyclohexanone monooxygenase {ECO:0000313|EMBL:AJW38067.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
scnpilot_cont_500_p_scaffold_258_44
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46284..47663)
DNA (1380bp) protein (460aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase {ECO:0000313|EMBL:AEA24744.1}; EC=6.2.1.30 {ECO:0000313|EMBL:AEA24744.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocard
Phenylacetate--CoA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ40_PSEUX rbh
scnpilot_cont_500_p_scaffold_258_45
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47665..48771)
DNA (1107bp) protein (369aa)
Luciferase-like, subgroup n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ37_PSEUX rbh
luciferase-like protein
Luciferase-like, subgroup {ECO:0000313|EMBL:AEA24741.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_258_46
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48953..49321
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ36_PSEUX
Putative nucleic-acid-binding protein containing a Zn-ribbon {ECO:0000313|EMBL:KID27830.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" sourc
hypothetical protein
scnpilot_cont_500_p_scaffold_258_47
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49318..50445
DNA (1128bp) protein (376aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KID27831.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KID27831.1};; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserel
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
acetyl-CoA acyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE676 rbh
scnpilot_cont_500_p_scaffold_258_48
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50442..51677
DNA (1236bp) protein (412aa)
peroxidase (EC:1.11.1.7)
cytochrome P450 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE675 rbh
Cytochrome P450 {ECO:0000313|EMBL:KID27832.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
scnpilot_cont_500_p_scaffold_258_49
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51700..52476)
DNA (777bp) protein (259aa)
short-chain dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE674 rbh
Uncharacterized protein {ECO:0000313|EMBL:KID27834.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
short-chain dehydrogenase/reductase SDR
scnpilot_cont_500_p_scaffold_258_50
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52473..53126)
DNA (654bp) protein (218aa)
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE673 rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KID27833.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_258_51
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53192..53938)
DNA (747bp) protein (249aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0G6_PSEUX
hypothetical protein
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:AEA26762.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
scnpilot_cont_500_p_scaffold_258_52
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54000..54302)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:AGL17080.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_258_53
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54847..55671
DNA (825bp) protein (275aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:AEA26768.1}; EC=4.2.99.18 {ECO:0000313|EMBL:AEA26768.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiac
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0H2_PSEUX rbh
scnpilot_cont_500_p_scaffold_258_54
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55689..56576)
DNA (888bp) protein (296aa)
Phage shock protein A, PspA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0H3_PSEUX rbh
phage shock protein A, PspA
Phage shock protein A, PspA {ECO:0000313|EMBL:AEA26769.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
scnpilot_cont_500_p_scaffold_258_55
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56827..57249)
DNA (423bp) protein (141aa)
Helix-turn-helix domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0H4_PSEUX
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEA26770.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_258_56
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57370..57966)
DNA (597bp) protein (199aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0H5_PSEUX
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AEA26771.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;
scnpilot_cont_500_p_scaffold_258_57
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57963..59303)
DNA (1341bp) protein (447aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0H6_PSEUX rbh
30S ribosomal protein S12 methylthiotransferase
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
scnpilot_cont_500_p_scaffold_258_58
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59484..59981
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0H7_PSEUX
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA26773.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
scnpilot_cont_500_p_scaffold_258_59
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60073..60879
DNA (807bp) protein (269aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0H8_PSEUX
AraC family transcriptional regulator
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:AEA26774.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
scnpilot_cont_500_p_scaffold_258_60
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61452..62327)
DNA (876bp) protein (292aa)
YceI family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0I0_PSEUX rbh
hypothetical protein
YceI family protein {ECO:0000313|EMBL:AEA26776.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
Displaying items 31-60 of 76 in total

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