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scnpilot_cont_500_p_scaffold_258

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_258_1
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..723)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XEI7_9PSEU
Putative uncharacterized protein {ECO:0000313|EMBL:EHR62466.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="S
hypothetical protein
scnpilot_cont_500_p_scaffold_258_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(858..2318)
DNA (1461bp) protein (487aa)
GTPase HflX n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJA5_PSEUX rbh
GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
scnpilot_cont_500_p_scaffold_258_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2354..3178)
DNA (825bp) protein (275aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJA4_PSEUX rbh
diaminopimelate epimerase
scnpilot_cont_500_p_scaffold_258_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3180..4097)
DNA (918bp) protein (306aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE1A7 rbh
tRNA dimethylallyltransferase
scnpilot_cont_500_p_scaffold_258_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4085..4780)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJA2_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24341.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_258_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4995..6842
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJA1_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24340.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_258_7
unknown

Not on your lists

7148..7261
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_258_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7288..7755)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPT5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26118.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_258_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7755..9209)
DNA (1455bp) protein (485aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPT6_PSEUX rbh
(dimethylallyl)adenosine tRNA methylthiotransferase
scnpilot_cont_500_p_scaffold_258_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9269..10219
DNA (951bp) protein (317aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPT7_PSEUX rbh
TRAP transporter solute receptor, TAXI family
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:AEA26120.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoca
scnpilot_cont_500_p_scaffold_258_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10251..11702)
DNA (1452bp) protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPU1_PSEUX rbh
histidine kinase
scnpilot_cont_500_p_scaffold_258_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11705..12382)
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPU2_PSEUX rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA26125.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
scnpilot_cont_500_p_scaffold_258_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12488..13246
DNA (759bp) protein (253aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEA26126.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEA26126.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
arginine ABC transporter ATP-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE860 rbh
scnpilot_cont_500_p_scaffold_258_14
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13281..14180
DNA (900bp) protein (300aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X0X0_9PSEU rbh
Glutamate-binding protein of ABC transporter system {ECO:0000313|EMBL:EWC58290.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Ac
ABC transporter periplasmic protein
scnpilot_cont_500_p_scaffold_258_15
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14260..14925
DNA (666bp) protein (222aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X0X1_9PSEU
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EHR51971.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
Polar amino acid ABC transporter, inner membrane subunit
scnpilot_cont_500_p_scaffold_258_16
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14963..15868
DNA (906bp) protein (302aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X0X2_9PSEU rbh
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:KEI44279.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopoly
polar amino acid ABC transporter inner membrane subunit
scnpilot_cont_500_p_scaffold_258_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15865..17799)
DNA (1935bp) protein (645aa)
peptidase S9 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE865 rbh
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:AEA26737.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
scnpilot_cont_500_p_scaffold_258_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17854..18450)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNU9_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22561.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_258_19
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18460..18852)
DNA (393bp) protein (131aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035D2554
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Uncharacterized protein {ECO:0000313|EMBL:GAJ83382.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
scnpilot_cont_500_p_scaffold_258_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18891..19826)
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNU8_PSEUX rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEA22560.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_258_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19823..20581)
DNA (759bp) protein (253aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNU7_PSEUX rbh
AraC family transcriptional regulator
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:AEA22559.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
scnpilot_cont_500_p_scaffold_258_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20623..20961)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0E2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26738.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_258_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20976..21269
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0E4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26740.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_258_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21367..22122)
DNA (756bp) protein (252aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0E5_PSEUX rbh
succinate dehydrogenase and fumarate reductase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:AEA26741.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
scnpilot_cont_500_p_scaffold_258_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22119..24035)
DNA (1917bp) protein (639aa)
Succinate dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:AEA26742.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AEA26742.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Ps
succinate dehydrogenase (ubiquinone) (EC:1.3.5.1)
Succinate dehydrogenase (Ubiquinone) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0E6_PSEUX rbh
scnpilot_cont_500_p_scaffold_258_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24048..24848)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0E7_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26743.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_258_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24996..25751)
DNA (756bp) protein (252aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocar
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0E8_PSEUX rbh
succinate dehydrogenase and fumarate reductase iron-sulfur protein
scnpilot_cont_500_p_scaffold_258_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25751..27691)
DNA (1941bp) protein (647aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:AEA26745.1}; EC=1.3.99.1 {ECO:0000313|EMBL:AEA26745.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonoc
succinate dehydrogenase or fumarate reductase, flavoprotein subunit (EC:1.3.99.1)
succinate dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE7D4 rbh
scnpilot_cont_500_p_scaffold_258_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27709..28419)
DNA (711bp) protein (237aa)
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0F0_PSEUX
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family {ECO:0000313|EMBL:AEA26746.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
scnpilot_cont_500_p_scaffold_258_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28498..29445
DNA (948bp) protein (316aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0F1_PSEUX rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEA26747.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
Displaying items 1-30 of 76 in total

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