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scnpilot_cont_500_p_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_263_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(448..720)
DNA (273bp) protein (91aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatoph
Signal peptidase I n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAE1_GEOOG
signal peptidase I
scnpilot_cont_500_p_scaffold_263_2
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

844..1380
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RX35_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG03443.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
scnpilot_cont_500_p_scaffold_263_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1597..1875)
DNA (279bp) protein (93aa)
Transcription regulator, AsnC-type n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL31_PSEUX
AsnC family transcriptional regulator
Transcription regulator, AsnC-type {ECO:0000313|EMBL:AEA24960.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_263_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1915..3726)
DNA (1812bp) protein (604aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:AEA24961.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEA24961.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
DNA polymerase III, epsilon subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL32_PSEUX rbh
scnpilot_cont_500_p_scaffold_263_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3983..5299
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL33_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24962.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_263_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5563..5844
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL34_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24963.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_263_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6082..7209
DNA (1128bp) protein (376aa)
NLP/P60 protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL35_PSEUX rbh
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AEA24964.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_263_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7298..8419
DNA (1122bp) protein (374aa)
Glycosyl transferase group 1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL36_PSEUX rbh
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEA24965.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
scnpilot_cont_500_p_scaffold_263_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8440..10263)
DNA (1824bp) protein (608aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEA24966.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEA24966.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
long-chain fatty acid--CoA ligase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE689 rbh
scnpilot_cont_500_p_scaffold_263_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10395..10802
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL38_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24967.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_263_11
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10805..11593
DNA (789bp) protein (263aa)
Metallophosphoesterase n=1 Tax=Streptomyces sp. AA4 RepID=D9UWK2_9ACTO rbh
Metallophosphoesterase {ECO:0000313|EMBL:KEI44251.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.
metallophosphoesterase
scnpilot_cont_500_p_scaffold_263_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11622..12062
DNA (441bp) protein (147aa)
Cyclase/dehydrase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL40_PSEUX
cyclase
Cyclase/dehydrase {ECO:0000313|EMBL:AEA24969.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain A
scnpilot_cont_500_p_scaffold_263_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12168..13397
DNA (1230bp) protein (410aa)
arsenite-transporting ATPase (EC:3.6.3.16)
Arsenite-transporting ATPase {ECO:0000313|EMBL:AEA24970.1}; EC=3.6.3.16 {ECO:0000313|EMBL:AEA24970.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoc
Arsenite-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL41_PSEUX rbh
scnpilot_cont_500_p_scaffold_263_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13394..13723
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL42_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24971.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_263_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13791..14738
DNA (948bp) protein (316aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:AEA24972.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEA24972.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="P
Glucokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL43_PSEUX rbh
scnpilot_cont_500_p_scaffold_263_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14748..15302)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL44_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24973.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_263_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15516..16244
DNA (729bp) protein (243aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL45_PSEUX rbh
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEA24974.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
scnpilot_cont_500_p_scaffold_263_18
unknown

Not on your lists

16313..16987
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI00036B002A
scnpilot_cont_500_p_scaffold_263_19
unknown

Not on your lists

comp(17130..17246)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_263_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17878..19134
DNA (1257bp) protein (419aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMR9_PSEUX rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA24436.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_263_21
unknown

Not on your lists

comp(19091..19345)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000375049D
scnpilot_cont_500_p_scaffold_263_22
Renibacterium salmoninarum, Renibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19392..19736)
DNA (345bp) protein (115aa)
Sugar transport system permease n=1 Tax=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) RepID=A9WMU7_RENSM
sugar transport system permease
Sugar transport system permease {ECO:0000313|EMBL:ABY23442.1}; TaxID=288705 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Renibacterium.;" source="Renibacterium salmoninarum (strai
scnpilot_cont_500_p_scaffold_263_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19865..20353
DNA (489bp) protein (163aa)
3'-5' exoribonuclease {ECO:0000256|HAMAP-Rule:MF_00977}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00977};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudono
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL47_PSEUX rbh
hypothetical protein
scnpilot_cont_500_p_scaffold_263_24
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20369..20512)
DNA (144bp) protein (48aa)
Putative uncharacterized protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S0K3_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV82159.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 3104
scnpilot_cont_500_p_scaffold_263_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20636..22027
DNA (1392bp) protein (464aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AEA24978.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AEA24978.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL49_PSEUX rbh
scnpilot_cont_500_p_scaffold_263_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22037..23767)
DNA (1731bp) protein (577aa)
serine/threonine protein kinase with PASTA sensor(s) (EC:2.7.11.17)
Serine/threonine protein kinase with PASTA sensor(S) {ECO:0000313|EMBL:AEA24979.1}; EC=2.7.11.17 {ECO:0000313|EMBL:AEA24979.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseu
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL50_PSEUX rbh
scnpilot_cont_500_p_scaffold_263_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23835..24188
DNA (354bp) protein (118aa)
Transcriptional regulatory protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL51_PSEUX
transcriptional regulatory protein
Transcriptional regulatory protein {ECO:0000313|EMBL:AEA24980.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_263_28
Streptomyces ambofaciens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24336..24611)
DNA (276bp) protein (92aa)
Putative DNA-binding protein n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KI48_STRAM
Putative DNA-binding protein {ECO:0000313|EMBL:CAJ89376.1}; TaxID=278992 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ambofaciens ATCC 2
SCF51.17; DNA-binding protein
scnpilot_cont_500_p_scaffold_263_29
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(25306..26598)
DNA (1293bp) protein (431aa)
Glutamate-ammonia ligase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK55_9CHLR rbh
Glutamate-ammonia ligase {ECO:0000313|EMBL:CCF85067.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" sourc
glnA; glutamine synthetase
scnpilot_cont_500_p_scaffold_263_30
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26595..27713)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AU58_STRRD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90513.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
Displaying items 1-30 of 55 in total

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