ggKbase home page

scnpilot_cont_500_p_scaffold_280

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_280_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109..1578)
DNA (1470bp) protein (490aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEA22393.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEA22393.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
Peptidoglycan glycosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQF5_PSEUX
scnpilot_cont_500_p_scaffold_280_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1730..2665
DNA (936bp) protein (312aa)
stearoyl-CoA 9-desaturase (EC:1.14.19.1)
Stearoyl-CoA 9-desaturase {ECO:0000313|EMBL:AEA23133.1}; EC=1.14.19.1 {ECO:0000313|EMBL:AEA23133.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar
Stearoyl-CoA 9-desaturase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTV8_PSEUX rbh
scnpilot_cont_500_p_scaffold_280_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2806..3477
DNA (672bp) protein (224aa)
GlcNAc-PI de-N-acetylase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE897 rbh
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:AEA23134.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_280_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3543..3824
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTW0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23135.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_280_5
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3875..5104)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036F3E6F rbh
gcd; glucose dehydrogenase rbh
Glucose dehydrogenase {ECO:0000313|EMBL:AIJ26049.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_280_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5173..8436
DNA (3264bp) protein (1088aa)
Peptidase S41 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTW1_PSEUX rbh
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AEA23136.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_280_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8821..12366
DNA (3546bp) protein (1182aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=675635 species="Bacteria; Ac
Transcription-repair-coupling factor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTW4_PSEUX rbh
transcription-repair coupling factor
scnpilot_cont_500_p_scaffold_280_8
Segniliparus rotundus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12363..12809
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035D415C
RDD domain-containing protein
RDD domain containing protein {ECO:0000313|EMBL:ADG96822.1}; TaxID=640132 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rotundus (strain A
scnpilot_cont_500_p_scaffold_280_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12848..13729
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00037F1F85
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23140.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_280_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13733..14638
DNA (906bp) protein (302aa)
MazG family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTW6_PSEUX rbh
nucleotide pyrophosphohydrolase
MazG family protein {ECO:0000313|EMBL:AEA23141.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_280_11
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14777..15490
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD0A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU97461.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (st
scnpilot_cont_500_p_scaffold_280_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15618..16841)
DNA (1224bp) protein (408aa)
Tat-translocated protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTW8_PSEUX rbh
Tat-translocated protein
Tat-translocated protein {ECO:0000313|EMBL:AEA23143.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_280_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16838..17971)
DNA (1134bp) protein (378aa)
Peptidase M75, Imelysin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTW9_PSEUX rbh
peptidase M75, Imelysin
Peptidase M75, Imelysin {ECO:0000313|EMBL:AEA23144.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_280_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17979..18809)
DNA (831bp) protein (277aa)
Iron permease FTR1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTX0_PSEUX rbh
iron permease
Iron permease FTR1 {ECO:0000313|EMBL:AEA23145.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_280_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18939..19343)
DNA (405bp) protein (135aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTX4_PSEUX
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEA23149.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudo
scnpilot_cont_500_p_scaffold_280_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19503..20795
DNA (1293bp) protein (431aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTX5_PSEUX rbh
scnpilot_cont_500_p_scaffold_280_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20800..21294
DNA (495bp) protein (165aa)
Septum formation initiator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTX6_PSEUX
septum formation initiator
Septum formation initiator {ECO:0000313|EMBL:AEA23151.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
scnpilot_cont_500_p_scaffold_280_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21291..21788
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTX7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23152.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_280_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21969..23717)
DNA (1749bp) protein (583aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTX8_PSEUX rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEA23153.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
scnpilot_cont_500_p_scaffold_280_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23830..24783
DNA (954bp) protein (318aa)
Ppx/GppA phosphatase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTX9_PSEUX rbh
Ppx/GppA phosphatase
Ppx/GppA phosphatase {ECO:0000313|EMBL:AEA23154.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strai
scnpilot_cont_500_p_scaffold_280_21
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24780..25466
DNA (687bp) protein (229aa)
uracil-DNA glycosylase (EC:3.2.2.-)
Uncharacterized protein n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WF38_9NOCA rbh
Uncharacterized protein {ECO:0000313|EMBL:EID75004.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 132
scnpilot_cont_500_p_scaffold_280_22
unknown

Not on your lists

comp(25474..25731)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_280_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25816..27204
DNA (1389bp) protein (463aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:AEA23156.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEA23156.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
NADH dehydrogenase (Ubiquinone) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTY1_PSEUX rbh
scnpilot_cont_500_p_scaffold_280_24
unknown

Not on your lists

27290..28039
DNA (750bp) protein (250aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_280_25
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28032..28733
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037B4B6B
Putative Crp family transcriptional regulator {ECO:0000313|EMBL:GAB94182.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limo
Crp/Fnr family transcriptional regulator
scnpilot_cont_500_p_scaffold_280_26
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28815..29276
DNA (462bp) protein (154aa)
cupin n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036D2311
Cupin {ECO:0000313|EMBL:KJC56578.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
cupin
scnpilot_cont_500_p_scaffold_280_27
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29509..30300
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3BSE7_9ACTO
Methyltransferase {ECO:0000313|EMBL:KFF98747.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_280_28
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30452..31258)
DNA (807bp) protein (269aa)
Phenazine biosynthesis protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H7X3_STRPR rbh
oxidoreductase rbh
Oxidoreductase {ECO:0000313|EMBL:EXU62052.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
scnpilot_cont_500_p_scaffold_280_29
unknown

Not on your lists

comp(31350..31619)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD6D
scnpilot_cont_500_p_scaffold_280_30
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31633..32451)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Saccharomonospora saliphila RepID=UPI00037F229B
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCH27968.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (str
Displaying items 1-30 of 54 in total

View Taxonomy