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scnpilot_cont_500_p_scaffold_303

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_303_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(214..606)
DNA (393bp) protein (131aa)
Large conductance mechanosensitive channel protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP15_PSEUX
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
scnpilot_cont_500_p_scaffold_303_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(633..1277)
DNA (645bp) protein (215aa)
SAF domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP16_PSEUX
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:AEA23052.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_303_3
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1372..1764)
DNA (393bp) protein (131aa)
FmdB family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF271
Uncharacterized protein {ECO:0000313|EMBL:GAJ82640.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_303_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1777..2373)
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiacea
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP18_PSEUX
5-formyltetrahydrofolate cyclo-ligase
scnpilot_cont_500_p_scaffold_303_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2410..3288
DNA (879bp) protein (293aa)
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AEA23055.1}; EC=2.7.7.9 {ECO:0000313|EMBL:AEA23055.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP19_PSEUX rbh
scnpilot_cont_500_p_scaffold_303_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3296..4519
DNA (1224bp) protein (408aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP20_PSEUX rbh
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:AEA23056.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
scnpilot_cont_500_p_scaffold_303_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4533..5198
DNA (666bp) protein (222aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP21_PSEUX rbh
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA23057.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
scnpilot_cont_500_p_scaffold_303_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5407..6399
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP22_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23058.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_303_9
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6627..8600)
DNA (1974bp) protein (658aa)
Putative galactose oxidase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EX34_MODMB rbh
galactose oxidase rbh
Putative galactose oxidase {ECO:0000313|EMBL:CCH87947.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (stra
scnpilot_cont_500_p_scaffold_303_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8648..9256
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQR1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23079.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_303_11
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9324..10877
DNA (1554bp) protein (518aa)
proteinase n=1 Tax=Saccharopolyspora erythraea RepID=UPI0001D3145E rbh
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EXG82344.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Crypt
slpD; proteinase rbh
scnpilot_cont_500_p_scaffold_303_12
unknown

Not on your lists

comp(11223..11351)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_303_13
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11815..12444)
DNA (630bp) protein (210aa)
transcriptional regulator n=1 Tax=Streptomyces sulphureus RepID=UPI00036127F2
XRE family transcriptional regulator {ECO:0000313|EMBL:KJV10194.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera
XRE family transcriptional regulator
scnpilot_cont_500_p_scaffold_303_14
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

12523..13413
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036EE856
hypothetical protein Tax=RBG_13_Spirochaetes_68_11_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_303_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13414..15030)
DNA (1617bp) protein (539aa)
Glycosyl transferase family 39 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQR3_PSEUX rbh
glycosyl transferase protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:AEA23081.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_303_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15085..15903
DNA (819bp) protein (273aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQR4_PSEUX rbh
ribosomal RNA small subunit methyltransferase I
scnpilot_cont_500_p_scaffold_303_17
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15935..16627
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q5A2_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD44151.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM
scnpilot_cont_500_p_scaffold_303_18
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16652..17842)
DNA (1191bp) protein (397aa)
Monovalent cation:H+ antiporter-2, CPA2 family protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I292_9PSEU rbh
Monovalent cation:H+ antiporter-2, CPA2 family protein {ECO:0000313|EMBL:EOD64559.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="A
potassium transporter
scnpilot_cont_500_p_scaffold_303_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17839..18315)
DNA (477bp) protein (159aa)
TrkA-C domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQR6_PSEUX
TrkA-C domain-containing protein
TrkA-C domain protein {ECO:0000313|EMBL:AEA23084.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (stra
scnpilot_cont_500_p_scaffold_303_20
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18386..19777
DNA (1392bp) protein (464aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
glucose-6-phosphate 1-dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC79 rbh
scnpilot_cont_500_p_scaffold_303_21
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19774..21561
DNA (1788bp) protein (596aa)
Glucoamylase {ECO:0000313|EMBL:EWC63306.1}; EC=3.2.1.3 {ECO:0000313|EMBL:EWC63306.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source
glucoamylase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC7A rbh
glycosyl hydrolase
scnpilot_cont_500_p_scaffold_303_22
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21579..22130
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W5D1_KINRD
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_303_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


22176..23966
DNA (1791bp) protein (597aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQS0_PSEUX rbh
scnpilot_cont_500_p_scaffold_303_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24049..24921
DNA (873bp) protein (291aa)
Hydrolase, TatD family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQS1_PSEUX rbh
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:AEA23089.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
scnpilot_cont_500_p_scaffold_303_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25131..26744
DNA (1614bp) protein (538aa)
Transglycosylase-like domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQS2_PSEUX rbh
transglycosylase-like domain-containing protein
Transglycosylase-like domain protein {ECO:0000313|EMBL:AEA23090.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia diox
scnpilot_cont_500_p_scaffold_303_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26761..27633
DNA (873bp) protein (291aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQS3_PSEUX rbh
ribosomal RNA small subunit methyltransferase A
scnpilot_cont_500_p_scaffold_303_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27669..29186
DNA (1518bp) protein (506aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQS5_PSEUX rbh
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AEA23093.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
scnpilot_cont_500_p_scaffold_303_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29230..30201
DNA (972bp) protein (324aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQS6_PSEUX rbh
scnpilot_cont_500_p_scaffold_303_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30201..32021
DNA (1821bp) protein (607aa)
ABC transporter related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSC1_PSEUX rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEA23095.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_303_30
unknown

Not on your lists

32216..32593
DNA (378bp) protein (126aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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