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scnpilot_cont_500_p_scaffold_444

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_444_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(213..2447)
DNA (2235bp) protein (745aa)
UvrABC system protein B n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN21_PSEUX rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
UvrABC system protein B
scnpilot_cont_500_p_scaffold_444_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2486..2995
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN22_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26035.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_444_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3007..3597)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN23_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26036.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_444_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3594..4241)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE809
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA26037.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
scnpilot_cont_500_p_scaffold_444_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4359..5558)
DNA (1200bp) protein (400aa)
Dephospho-CoA kinase (EC:2.7.1.24) rbh
dephospho-CoA kinase n=1 Tax=Saccharopolyspora erythraea RepID=UPI0001D315B4 rbh
Dephospho-CoA kinase {ECO:0000313|EMBL:EWM12472.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
scnpilot_cont_500_p_scaffold_444_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5648..6331)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE807
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26039.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_444_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6465..7952)
DNA (1488bp) protein (496aa)
30S ribosomal protein S1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN27_PSEUX rbh
RNA binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:AEA26040.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_444_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8219..8986
DNA (768bp) protein (256aa)
Methyltransferase type 11 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN28_PSEUX rbh
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEA26041.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_444_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9366..9797
DNA (432bp) protein (144aa)
aromatic compound degradation protein PaaI n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE802
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:AEA26042.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoca
scnpilot_cont_500_p_scaffold_444_10
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10138..10860)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003666370 rbh
High-affinity branched-chain amino acid transport ATP-binding protein LivF rbh
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:AHH95977.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzne
scnpilot_cont_500_p_scaffold_444_11
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10857..11663)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003700C2E rbh
High-affinity branched-chain amino acid transport ATP-binding protein LivG rbh
High-affinity branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:AHH95976.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzne
scnpilot_cont_500_p_scaffold_444_12
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11660..13405)
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003810FAC rbh
putative membrane protein rbh
Putative membrane protein {ECO:0000313|EMBL:AHH95975.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_cont_500_p_scaffold_444_13
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13402..14331)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000360A87A rbh
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) {ECO:0000313|EMBL:CEL17670.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudono
amino acid/amide ABC transporter membrane protein 1, HAAT family
scnpilot_cont_500_p_scaffold_444_14
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14430..15662)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036D5DB3 rbh
Branched-chain amino acid ABC transporter periplasmic amino acid-binding protein {ECO:0000313|EMBL:EWM12487.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; K
extracellular ligand-binding receptor
scnpilot_cont_500_p_scaffold_444_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15846..16481)
DNA (636bp) protein (212aa)
Response regulator receiver and ANTAR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN35_PSEUX rbh
response regulator receiver and ANTAR domain-containing protein
Response regulator receiver and ANTAR domain protein {ECO:0000313|EMBL:AEA26048.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
scnpilot_cont_500_p_scaffold_444_16
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16713..17036)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI0003692D99
Uncharacterized protein {ECO:0000313|EMBL:CDP50176.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_444_17
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17033..18166)
DNA (1134bp) protein (378aa)
membrane dipeptidase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003634BEA rbh
Putative dipeptidase {ECO:0000313|EMBL:CEL14664.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_444_18
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18270..19373
DNA (1104bp) protein (368aa)
High-affinity nickel-transport protein n=4 Tax=Amycolatopsis mediterranei RepID=I7ECZ9_AMYMS
High-affinity nickel-transporter, HoxN/HupN/NixA family {ECO:0000313|EMBL:CDO24425.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Myco
nixA; high-affinity nickel-transport protein
scnpilot_cont_500_p_scaffold_444_19
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19391..19864
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE7A
Putative uncharacterized protein {ECO:0000313|EMBL:EDY61686.2}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespira
hypothetical protein
scnpilot_cont_500_p_scaffold_444_20
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19918..20520
DNA (603bp) protein (201aa)
type 11 methyltransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B55F1D
Methyltransferase type 11 {ECO:0000313|EMBL:KGH47748.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;
type 11 methyltransferase
scnpilot_cont_500_p_scaffold_444_21
Ornithorhynchus anatinus, Ornithorhynchus, Monotremata, Mammalia, Chordata, Metazoa

Not on your lists

20782..21507
DNA (726bp) protein (242aa)
Uncharacterized protein (Fragment) n=2 Tax=Ornithorhynchus anatinus RepID=F7B6H4_ORNAN
Srrm2; serine/arginine repetitive matrix 2
Uncharacterized protein {ECO:0000313|Ensembl:ENSOANP00000004221}; TaxID=9258 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornith
scnpilot_cont_500_p_scaffold_444_22
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21567..22688)
DNA (1122bp) protein (374aa)
Putative ABC transporter substrate binding protein n=1 Tax=Frankia sp. CN3 RepID=G6HBK4_9ACTO
ABC transporter substrate binding protein
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:ADP83908.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia
scnpilot_cont_500_p_scaffold_444_23
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22699..23511)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000367545F
Hydroxymethylpyrimidine ABC transporter, transmembrane component
Hydroxymethylpyrimidine ABC transporter, transmembrane component {ECO:0000313|EMBL:AJW38232.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source=
scnpilot_cont_500_p_scaffold_444_24
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23508..24275)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000368344F rbh
Nitrate ABC transporter ATPase {ECO:0000313|EMBL:GAM44626.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase
scnpilot_cont_500_p_scaffold_444_25
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24272..25138)
DNA (867bp) protein (289aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DGC8_9NOCA rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:CCQ15774.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus
hypothetical protein
scnpilot_cont_500_p_scaffold_444_26
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25243..25989)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Saccharomonospora azurea RepID=H8GEB4_9PSEU rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EHK80239.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea S
short-chain dehydrogenase/reductase SDR rbh
scnpilot_cont_500_p_scaffold_444_27
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26028..26423)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003660B8C
Methyltransferase {ECO:0000313|EMBL:KIE39424.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
putative methyltransferase, YaeB/AF_0241 family
scnpilot_cont_500_p_scaffold_444_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26460..27263
DNA (804bp) protein (268aa)
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0W0_PSEUX rbh
shikimate dehydrogenase substrate binding domain-containing protein
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:AEA25812.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
scnpilot_cont_500_p_scaffold_444_29
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27333..27695
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE90
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ02258.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedoni
scnpilot_cont_500_p_scaffold_444_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27771..28340)
DNA (570bp) protein (190aa)
SAM-dependent methyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE648
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEA25297.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
Displaying items 1-30 of 104 in total

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