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scnpilot_cont_500_p_scaffold_509

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_509_1
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1187
DNA (1185bp) protein (395aa)
AMP-dependent synthetase and ligase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIK6_BRESC
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADL01339.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brev
scnpilot_cont_500_p_scaffold_509_2
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1184..1444
DNA (261bp) protein (87aa)
3-ketoacyl-ACP reductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF37D
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADL01340.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="
scnpilot_cont_500_p_scaffold_509_3
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1467..2231
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ADW8_THECD rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY97578.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonosp
scnpilot_cont_500_p_scaffold_509_4
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2670..3008
DNA (339bp) protein (113aa)
YCII-related protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HTP1_MYCRH
Uncharacterized protein {ECO:0000313|EMBL:ETK30492.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
scnpilot_cont_500_p_scaffold_509_5
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3055..3276)
DNA (222bp) protein (74aa)
glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1BBN1_RHOOB
Glycosyl transferase, family 39 {ECO:0000313|EMBL:EWC64033.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora sphec
scnpilot_cont_500_p_scaffold_509_6
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3372..4259)
DNA (888bp) protein (296aa)
UPI0003D02F0A related cluster n=1 Tax=unknown RepID=UPI0003D02F0A
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AHH16379.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
scnpilot_cont_500_p_scaffold_509_7
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4373..5218
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035FDF8F
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:ADI04987.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggen
scnpilot_cont_500_p_scaffold_509_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5303..6457)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035EBCFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU71086.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
scnpilot_cont_500_p_scaffold_509_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6510..7505
DNA (996bp) protein (332aa)
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE6_PSEUX rbh
cytochrome c oxidase caa3-type, assembly factor CtaG-like protein
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AEA27170.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
scnpilot_cont_500_p_scaffold_509_10
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7626..9563
DNA (1938bp) protein (646aa)
beta-ketoacyl-ACP synthase (EC:2.3.1.180)
Beta-ketoacyl-acyl-carrier-protein synthase III {ECO:0000313|EMBL:CCH87888.1}; EC=2.3.1.180 {ECO:0000313|EMBL:CCH87888.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geoderm
3-ketoacyl-ACP synthase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC9C rbh
scnpilot_cont_500_p_scaffold_509_11

Not on your lists

9572..10333
DNA (762bp) protein (254aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CBI02833.1}; EC=1.1.1.36 {ECO:0000313|EMBL:CBI02833.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.
phbB; acetoacetyl-CoA reductase (EC:1.1.1.36)
3-ketoacyl-ACP reductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC9E rbh
scnpilot_cont_500_p_scaffold_509_12
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10383..12020)
DNA (1638bp) protein (546aa)
Cation/acetate symporter ActP n=1 Tax=Streptomyces sp. AA4 RepID=D9VCN8_9ACTO rbh
Cation/acetate symporter ActP {ECO:0000313|EMBL:EFL05573.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
acetate permease
scnpilot_cont_500_p_scaffold_509_13
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12017..12373)
DNA (357bp) protein (119aa)
clumping factor B n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023798D6
Clumping factor B {ECO:0000313|EMBL:KJK47581.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia
hypothetical protein
scnpilot_cont_500_p_scaffold_509_14
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12501..14171)
DNA (1671bp) protein (557aa)
transporter n=1 Tax=Amycolatopsis nigrescens RepID=UPI000367BC4D rbh
Transmembrane transport protein {ECO:0000313|EMBL:EOD63411.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmy
transmembrane transport protein
scnpilot_cont_500_p_scaffold_509_15
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14168..14515)
DNA (348bp) protein (116aa)
membrane protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262865C
Membrane protein {ECO:0000313|EMBL:KDN21489.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_509_16
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14512..15255)
DNA (744bp) protein (248aa)
LytR family transcriptional regulator n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036F87AD rbh
LytR family transcriptional regulator {ECO:0000313|EMBL:KFZ80231.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp.
two-component system response regulator
scnpilot_cont_500_p_scaffold_509_17
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15252..16304)
DNA (1053bp) protein (351aa)
ATP-binding region, ATPase-like n=1 Tax=Thermobifida fusca (strain YX) RepID=Q47KY2_THEFY rbh
ATP-binding region, ATPase-like protein {ECO:0000313|EMBL:EWC62912.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospo
ATP-binding region, ATPase-like rbh
scnpilot_cont_500_p_scaffold_509_18
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16342..17160)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YR33_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD59358.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
scnpilot_cont_500_p_scaffold_509_19
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17584..19323)
DNA (1740bp) protein (580aa)
exopolyphosphatase n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003615D02 rbh
hypothetical protein
Mycobacterium llatzerense strain CLUC14 Mllat_contig000007, whole genome shotgun sequence {ECO:0000313|EMBL:KIU17625.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteria
scnpilot_cont_500_p_scaffold_509_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19320..20114)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWU3_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23845.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_509_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20114..21616)
DNA (1503bp) protein (501aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEA23843.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEA23843.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
acid--CoA ligase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE30B rbh
scnpilot_cont_500_p_scaffold_509_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21613..23568)
DNA (1956bp) protein (652aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:AEA23840.1}; EC=6.4.1.4 {ECO:0000313|EMBL:AEA23840.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
Methylcrotonoyl-CoA carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWT8_PSEUX rbh
scnpilot_cont_500_p_scaffold_509_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23678..25276)
DNA (1599bp) protein (533aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:AEA23839.1}; EC=6.4.1.4 {ECO:0000313|EMBL:AEA23839.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
Methylcrotonoyl-CoA carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWT7_PSEUX rbh
scnpilot_cont_500_p_scaffold_509_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25277..26818)
DNA (1542bp) protein (514aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEA23835.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEA23835.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
Long-chain-fatty-acid--CoA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWT3_PSEUX rbh
scnpilot_cont_500_p_scaffold_509_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26818..27972)
DNA (1155bp) protein (385aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA23834.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEA23834.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
Butyryl-CoA dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWT2_PSEUX rbh
scnpilot_cont_500_p_scaffold_509_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28035..28646
DNA (612bp) protein (204aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWT1_PSEUX rbh
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA23833.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_509_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28678..30336
DNA (1659bp) protein (553aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AEA23832.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AEA23832.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
Long-chain-fatty-acid--CoA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWT0_PSEUX rbh
scnpilot_cont_500_p_scaffold_509_28
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30337..31134
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K550_SACES rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31643.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
scnpilot_cont_500_p_scaffold_509_29
Mycobacterium phlei, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31200..31880
DNA (681bp) protein (227aa)
von Willebrand factor A n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RCN2_MYCPH
von Willebrand factor A {ECO:0000313|EMBL:EID08885.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
von Willebrand factor A
scnpilot_cont_500_p_scaffold_509_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32215..34215)
DNA (2001bp) protein (667aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEA22582.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEA22582.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
Xenobiotic-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQI4_PSEUX rbh
Displaying items 1-30 of 43 in total

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