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scnpilot_cont_500_p_scaffold_551

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_551_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..667
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY94_PSEUX
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:AEA24716.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseud
scnpilot_cont_500_p_scaffold_551_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

664..1401
DNA (738bp) protein (246aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY93_PSEUX rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEA24715.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
scnpilot_cont_500_p_scaffold_551_3
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1398..1793)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000372BE89
4-oxalocrotonate tautomerase family enzyme family protein {ECO:0000313|EMBL:EJI97406.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodoco
4-oxalocrotonate tautomerase
scnpilot_cont_500_p_scaffold_551_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1798..2145)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN55_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26068.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_551_5
unknown

Not on your lists

2262..2768
DNA (507bp) protein (169aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_551_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2750..3406)
DNA (657bp) protein (219aa)
nitrile hydratase (EC:4.2.1.84)
Nitrile hydratase, beta subunit n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A569_9PROT
Nitrile hydratase, beta subunit {ECO:0000313|EMBL:EHL97796.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;
scnpilot_cont_500_p_scaffold_551_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3403..3969)
DNA (567bp) protein (189aa)
nitrile hydratase subunit alpha (EC:4.2.1.84)
Nitrile hydratase, alpha subunit {ECO:0000313|EMBL:AEA26084.1}; EC=4.2.1.84 {ECO:0000313|EMBL:AEA26084.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
Nitrile hydratase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN71_PSEUX rbh
scnpilot_cont_500_p_scaffold_551_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4160..6067)
DNA (1908bp) protein (636aa)
cyclic nucleotide-binding protein (EC:3.1.1.5)
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AEA28524.1}; EC=3.1.1.5 {ECO:0000313|EMBL:AEA28524.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
Cyclic nucleotide-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTM1_PSEUX rbh
scnpilot_cont_500_p_scaffold_551_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6064..6825)
DNA (762bp) protein (254aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTM0_PSEUX rbh
cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:AEA28523.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_551_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6822..7553)
DNA (732bp) protein (244aa)
Putative sensor with HAMP domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTL9_PSEUX
sensor with HAMP domain-containing protein
Putative sensor with HAMP domain protein {ECO:0000313|EMBL:AEA28522.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
scnpilot_cont_500_p_scaffold_551_11
unknown

Not on your lists

comp(7550..7741)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_551_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7752..10736)
DNA (2985bp) protein (995aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTL8_PSEUX rbh
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AEA28521.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia diox
scnpilot_cont_500_p_scaffold_551_13
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10789..13491)
DNA (2703bp) protein (901aa)
Putative Glutenin, high molecular weight subunit DX5 n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MHP1_9ACTO rbh
Putative Glutenin, high molecular weight subunit DX5 {ECO:0000313|EMBL:EPJ36066.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Strept
LuxR family transcriptional regulator
scnpilot_cont_500_p_scaffold_551_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13534..14952)
DNA (1419bp) protein (473aa)
Aldehyde Dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY91_PSEUX rbh
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AEA24713.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
scnpilot_cont_500_p_scaffold_551_15
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15014..16042)
DNA (1029bp) protein (343aa)
4-hyroxy-2-oxovalerate aldolase n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003799936 rbh
mhpE; 4-hydroxy-2-ketovalerate aldolase rbh
4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase {ECO:0000313|EMBL:AEK42779.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" sou
scnpilot_cont_500_p_scaffold_551_16
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16039..16986)
DNA (948bp) protein (316aa)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042125};; Acetaldehyde dehydrogenase [
Acetaldehyde dehydrogenase n=4 Tax=Amycolatopsis mediterranei RepID=I7DYS8_AMYMS rbh
mhpF; acetaldehyde dehydrogenase rbh
scnpilot_cont_500_p_scaffold_551_17
unknown

Not on your lists

17048..17203
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_551_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17281..18021
DNA (741bp) protein (247aa)
Transcriptional regulator, IclR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUM6_PSEUX rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEA26340.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_551_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18106..19689
DNA (1584bp) protein (528aa)
Thiamine pyrophosphate protein central region n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S996_GEOOG rbh
thiamine pyrophosphate protein domain-containing protein
Thiamine pyrophosphate protein central region {ECO:0000313|EMBL:ADB75696.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geoder
scnpilot_cont_500_p_scaffold_551_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19808..20485
DNA (678bp) protein (226aa)
Transcriptional regulator, PadR-like family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN56_PSEUX
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEA26069.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
scnpilot_cont_500_p_scaffold_551_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20617..21897)
DNA (1281bp) protein (427aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPR2_PSEUX rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26095.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_551_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21992..22918
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPR3_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26096.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_551_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22911..23351)
DNA (441bp) protein (147aa)
Polyketide cyclase/dehydrase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI0_PSEUX
polyketide cyclase/dehydrase
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:AEA26554.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
scnpilot_cont_500_p_scaffold_551_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23351..24190)
DNA (840bp) protein (280aa)
TIM-barrel signal transduction protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI1_PSEUX rbh
TIM-barrel signal transduction protein
TIM-barrel signal transduction protein {ECO:0000313|EMBL:AEA26555.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_551_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24187..25410)
DNA (1224bp) protein (408aa)
Uncharacterized conserved protein UCP033271 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI2_PSEUX rbh
hypothetical protein
Uncharacterized conserved protein UCP033271 {ECO:0000313|EMBL:AEA26556.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
scnpilot_cont_500_p_scaffold_551_26
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25441..26526)
DNA (1086bp) protein (362aa)
Hemolysin-type calcium-binding region n=1 Tax=Patulibacter medicamentivorans RepID=H0EBS6_9ACTN
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:EHN08874.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="P
hemolysin-type calcium-binding protein
scnpilot_cont_500_p_scaffold_551_27
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26766..27923)
DNA (1158bp) protein (386aa)
yihS-like sugar isomerase (EC:5.-.-.-)
YihS-like uncharacterized sugar isomerase {ECO:0000313|EMBL:AEV84762.1}; EC=5.-.-.- {ECO:0000313|EMBL:AEV84762.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporacea
YihS-like uncharacterized sugar isomerase n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S286_ACTS5
scnpilot_cont_500_p_scaffold_551_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28052..30349)
DNA (2298bp) protein (766aa)
pyruvate dehydrogenase (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:AEA26097.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEA26097.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPR4_PSEUX rbh
scnpilot_cont_500_p_scaffold_551_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30424..30969
DNA (546bp) protein (182aa)
Transcriptional regulator, AsnC family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPR5_PSEUX
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEA26098.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_551_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31186..32532
DNA (1347bp) protein (449aa)
Beta-lactamase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPR6_PSEUX rbh
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEA26099.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
Displaying items 1-30 of 34 in total

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