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scnpilot_cont_500_p_scaffold_586

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_586_1
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1671
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTR9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCI54413.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
scnpilot_cont_500_p_scaffold_586_2
Metarhizium anisopliae, Metarhizium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(1931..2722)
DNA (792bp) protein (264aa)
Similar to Probable methylcobalamin:homocysteine methyltransferase acc. no. Q975N4 n=1 Tax=Pyronema omphalodes (strain CBS 100304) RepID=U4LMV3_PYROM
Methionine synthase II (Cobalamin-independent) {ECO:0000313|EMBL:KID64403.1}; Flags: Fragment;; TaxID=1276135 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreom
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
scnpilot_cont_500_p_scaffold_586_3
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2914..4134
DNA (1221bp) protein (407aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ87_PSEUX rbh
scnpilot_cont_500_p_scaffold_586_4
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4131..5822
DNA (1692bp) protein (564aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1121877 sp
formate--tetrahydrofolate ligase n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037ADDCE rbh
Formyltetrahydrofolate synthetase
scnpilot_cont_500_p_scaffold_586_5
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5911..6882
DNA (972bp) protein (324aa)
Cation diffusion facilitator family transporter n=3 Tax=Amycolatopsis mediterranei RepID=D8HL87_AMYMU
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KDN19475.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolato
cation diffusion facilitator family transporter
scnpilot_cont_500_p_scaffold_586_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7074..7892)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037564AD rbh
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:EXG82864.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="
hypothetical protein
scnpilot_cont_500_p_scaffold_586_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7962..9014
DNA (1053bp) protein (351aa)
Membrane protein AbrB duplication n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT03_PSEUX rbh
hypothetical protein
Membrane protein AbrB duplication {ECO:0000313|EMBL:AEA25302.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
scnpilot_cont_500_p_scaffold_586_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9148..9777
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003728EA7
Glyoxalase {ECO:0000313|EMBL:ETK32245.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_586_9
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9774..10313)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036AF1A7
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADD40764.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis
scnpilot_cont_500_p_scaffold_586_10
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10310..14719)
DNA (4410bp) protein (1470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;"
ATP-binding region ATPase domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FCH1_VERMA rbh
ATP-binding protein
scnpilot_cont_500_p_scaffold_586_11
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14905..16902
DNA (1998bp) protein (666aa)
stage II sporulation protein E n=1 Tax=Salinispora pacifica RepID=UPI0003606620 rbh
protein serine/threonine phosphatase
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ABW00297.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola
scnpilot_cont_500_p_scaffold_586_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17082..18116
DNA (1035bp) protein (345aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=675635 species="Bacteria; Actinobacteria; Pse
DNA polymerase IV n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IYY4_9PSEU rbh
scnpilot_cont_500_p_scaffold_586_13
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18161..18892)
DNA (732bp) protein (244aa)
Putative precorrin-6X reductase n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z1Y8_STRSW
cobalt-precorrin-6x reductase
Cobalt-precorrin-6x reductase {ECO:0000313|EMBL:AJE83793.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
scnpilot_cont_500_p_scaffold_586_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18889..19638)
DNA (750bp) protein (250aa)
precorrin-6A synthase (EC:2.1.1.152)
Precorrin-6A synthase (Deacetylating) {ECO:0000313|EMBL:AEA24909.1}; EC=2.1.1.152 {ECO:0000313|EMBL:AEA24909.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
Precorrin-6A synthase (Deacetylating) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJF7_PSEUX rbh
scnpilot_cont_500_p_scaffold_586_15
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19638..20687)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037CD622
Diacylglycerol kinase {ECO:0000313|EMBL:KJK10156.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
diacylglycerol kinase catalytic protein
scnpilot_cont_500_p_scaffold_586_16
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20725..21825)
DNA (1101bp) protein (367aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" sou
Alanine dehydrogenase n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q829A4_STRAW rbh
Alanine dehydrogenase rbh
scnpilot_cont_500_p_scaffold_586_17
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21893..22402
DNA (510bp) protein (170aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WFG0_KINRD
AsnC family transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABS05549.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radio
scnpilot_cont_500_p_scaffold_586_18
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22439..23332
DNA (894bp) protein (298aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F4V2_MODMB rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CCH90665.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter mari
scnpilot_cont_500_p_scaffold_586_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23329..24072
DNA (744bp) protein (248aa)
Abortive infection protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEX6_GEOOG rbh
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ADB74666.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus
scnpilot_cont_500_p_scaffold_586_20
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24308..25906)
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035DF8AA rbh
thiamine pyrophosphate protein central region
Thiamine pyrophosphate protein central region {ECO:0000313|EMBL:ADG89458.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispo
scnpilot_cont_500_p_scaffold_586_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25903..27117)
DNA (1215bp) protein (405aa)
major facilitator transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE3CB rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV80148.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (str
scnpilot_cont_500_p_scaffold_586_22
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27168..27920)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000363EF00 rbh
Predicted protein {ECO:0000313|EMBL:EFL08479.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
Transcriptional regulator, IclR
scnpilot_cont_500_p_scaffold_586_23
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27924..29141)
DNA (1218bp) protein (406aa)
cysteine desulfurase family protein (EC:2.8.1.7)
Cysteine desulfurase family protein {ECO:0000313|EMBL:ADB77475.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ADB77475.1};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; G
Cysteine desulfurase family protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S6Y3_GEOOG rbh
scnpilot_cont_500_p_scaffold_586_24
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29333..31945
DNA (2613bp) protein (871aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W9S5_ACTMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU37292.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC
scnpilot_cont_500_p_scaffold_586_25
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31974..33677)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATA2_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ84778.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
Displaying 25 items

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