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scnpilot_cont_500_p_scaffold_617

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_617_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..903)
DNA (903bp) protein (301aa)
Major facilitator superfamily MFS-1 n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1Z3_MODMB rbh
Major facilitator superfamily MFS-1
Major facilitator superfamily MFS-1 {ECO:0000313|EMBL:CCH89656.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter mari
scnpilot_cont_500_p_scaffold_617_2
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(912..2186)
DNA (1275bp) protein (425aa)
Putative membrane protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KLB1_9ACTO
Transmembrane protein {ECO:0000313|EMBL:CDO85727.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_617_3
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2461..2685
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00035FCBA0
two-component system response regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDN23614.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifam
scnpilot_cont_500_p_scaffold_617_4
unknown

Not on your lists

2682..2777
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_617_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2824..3951
DNA (1128bp) protein (376aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=6756
phosphoserine aminotransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBFB rbh
scnpilot_cont_500_p_scaffold_617_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4141..5400
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSB8_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22871.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_617_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5510..6043)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSB7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22870.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_617_8
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6049..6861)
DNA (813bp) protein (271aa)
putative tRNA/rRNA methyltransferase (EC:2.1.1.-) rbh
rRNA methyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF075 rbh
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:EWM14289.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
scnpilot_cont_500_p_scaffold_617_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7045..8550
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSB6_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22869.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_617_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8759..9652
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSB4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22867.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_617_11
unknown

Not on your lists

9649..10230
DNA (582bp) protein (194aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_617_12
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10234..11397
DNA (1164bp) protein (388aa)
putative secreted M23 family peptidase, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR10883.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA
scnpilot_cont_500_p_scaffold_617_13
unknown

Not on your lists

11402..12001
DNA (600bp) protein (200aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_617_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12030..13604
DNA (1575bp) protein (525aa)
Glycoside hydrolase family 16 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLQ0_PSEUX rbh
glycoside hydrolase protein
Glycoside hydrolase family 16 {ECO:0000313|EMBL:AEA28182.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_617_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13618..14553
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDA6 rbh
glycoside hydrolase protein
Glycoside hydrolase family 16 {ECO:0000313|EMBL:AEA28182.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_617_16
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14957..15208
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSB1_PSEUX
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCH27864.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (str
scnpilot_cont_500_p_scaffold_617_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15227..15964
DNA (738bp) protein (246aa)
serine 3-dehydrogenase (EC:1.1.1.276)
Serine 3-dehydrogenase {ECO:0000313|EMBL:AEA22863.1}; EC=1.1.1.276 {ECO:0000313|EMBL:AEA22863.1};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiac
Serine 3-dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSB0_PSEUX rbh
scnpilot_cont_500_p_scaffold_617_18
unknown

Not on your lists

comp(15969..16151)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_617_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16197..17381)
DNA (1185bp) protein (395aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSA8_PSEUX rbh
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEA22861.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Ps
scnpilot_cont_500_p_scaffold_617_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17490..18524)
DNA (1035bp) protein (345aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSA7_PSEUX rbh
UDP-N-acetylenolpyruvoylglucosamine reductase
scnpilot_cont_500_p_scaffold_617_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18542..19045
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSA6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22859.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_617_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19045..19917
DNA (873bp) protein (291aa)
formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=675635 species="Ba
Formyltetrahydrofolate deformylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSA4_PSEUX rbh
scnpilot_cont_500_p_scaffold_617_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20424..22742)
DNA (2319bp) protein (773aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSA3_PSEUX rbh
scnpilot_cont_500_p_scaffold_617_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22832..23380)
DNA (549bp) protein (183aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSA2_PSEUX
prolyl-tRNA synthetase
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:AEA22855.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoca
scnpilot_cont_500_p_scaffold_617_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23377..23784)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSA1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22854.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_617_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23866..24603)
DNA (738bp) protein (246aa)
Membrane spanning protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSA0_PSEUX
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:AEA22853.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_617_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24609..25043)
DNA (435bp) protein (145aa)
Helix-turn-helix domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS99_PSEUX
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEA22852.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_617_28
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25137..26963)
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00037D60B2 rbh
emrB; putative transporter rbh
Putative transporter {ECO:0000313|EMBL:AIJ26261.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_617_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

27040..27522
DNA (483bp) protein (161aa)
Transcriptional regulator, MarR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F910_CONWI
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB53005.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
scnpilot_cont_500_p_scaffold_617_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27533..27991
DNA (459bp) protein (153aa)
Putative fluoride ion transporter CrcB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CS98_PSEUX
CrcB-like protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
Displaying items 1-30 of 38 in total

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