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scnpilot_cont_500_p_scaffold_629

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_629_1
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..426)
DNA (426bp) protein (142aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDAB6
PPOX class F420-dependent protein {ECO:0000313|EMBL:CDO09113.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.
pyridoxamine 5'-phosphate oxidase
scnpilot_cont_500_p_scaffold_629_2
unknown

Not on your lists

comp(443..856)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003674392
hypothetical protein
scnpilot_cont_500_p_scaffold_629_3
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(917..2446)
DNA (1530bp) protein (510aa)
Putative fatty-acid--CoA ligase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRE3_BLASD rbh
putative fatty-acid--CoA ligase
Putative fatty-acid--CoA ligase {ECO:0000313|EMBL:CCG05425.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsiden
scnpilot_cont_500_p_scaffold_629_4
unknown

Not on your lists

2624..2800
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P9E8_9ACTO
scnpilot_cont_500_p_scaffold_629_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2801..3442)
DNA (642bp) protein (214aa)
Isochorismatase hydrolase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1D9_MODMB rbh
Isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:CCH89452.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strai
scnpilot_cont_500_p_scaffold_629_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3439..5295)
DNA (1857bp) protein (619aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEA26787.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEA26787.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0J1_PSEUX rbh
scnpilot_cont_500_p_scaffold_629_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5297..7339)
DNA (2043bp) protein (681aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEA26786.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEA26786.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0J0_PSEUX rbh
scnpilot_cont_500_p_scaffold_629_8
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7343..7996)
DNA (654bp) protein (218aa)
Transcriptional regulator n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5D9_9PSEU rbh
Transcriptional regulator {ECO:0000313|EMBL:EHR48940.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XM
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_629_9
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8087..8968
DNA (882bp) protein (294aa)
carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002629048 rbh
isocitrate lyase and phosphorylmutase
Isocitrate lyase and phosphorylmutase {ECO:0000313|EMBL:AIJ23420.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis meth
scnpilot_cont_500_p_scaffold_629_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9046..10119
DNA (1074bp) protein (358aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1M8_PSEUX rbh
scnpilot_cont_500_p_scaffold_629_11
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10116..10910)
DNA (795bp) protein (265aa)
ubiquinone biosynthesis protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7B929 rbh
Ubiquinone biosynthesis protein {ECO:0000313|EMBL:KDN87860.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanens
ubiquinone/menaquinone biosynthesis methyltransferase
scnpilot_cont_500_p_scaffold_629_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10931..12193)
DNA (1263bp) protein (421aa)
manganese transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF31C rbh
putative metal ion transport protein rbh
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes f
scnpilot_cont_500_p_scaffold_629_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12190..12858)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000380CECA
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ACZ38819.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae;
scnpilot_cont_500_p_scaffold_629_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12916..13473)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1M7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26939.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_629_15
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13482..13718)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7Q1_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH34406.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
scnpilot_cont_500_p_scaffold_629_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13771..14757
DNA (987bp) protein (329aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1M5_PSEUX rbh
scnpilot_cont_500_p_scaffold_629_17
unknown

Not on your lists

comp(14747..15472)
DNA (726bp) protein (242aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_629_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15575..16909)
DNA (1335bp) protein (445aa)
glycolate oxidase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDF85 rbh
hypothetical protein
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
scnpilot_cont_500_p_scaffold_629_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16914..18074)
DNA (1161bp) protein (387aa)
FAD linked oxidase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1L8_PSEUX rbh
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:AEA26930.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
scnpilot_cont_500_p_scaffold_629_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18071..19525)
DNA (1455bp) protein (485aa)
D-lactate dehydrogenase (EC:1.1.2.4)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEA26929.1}; EC=1.1.2.4 {ECO:0000313|EMBL:AEA26929.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Ps
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1L7_PSEUX rbh
scnpilot_cont_500_p_scaffold_629_21
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20145..21653
DNA (1509bp) protein (503aa)
Microbial collagenase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JZ12_9BACT
Microbial collagenase {ECO:0000313|EMBL:ELR73413.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
peptidase S8 and S53 subtilisin kexin sedolisin
scnpilot_cont_500_p_scaffold_629_22
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21636..23627)
DNA (1992bp) protein (664aa)
Putative two-component system histidine kinase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XLZ6_MICPN rbh
two-component system histidine kinase
Putative two-component system histidine kinase {ECO:0000313|EMBL:BAK33875.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microl
scnpilot_cont_500_p_scaffold_629_23
unknown

Not on your lists

comp(23654..24109)
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_629_24
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24204..24848)
DNA (645bp) protein (215aa)
Putative two-component system response regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XLZ8_MICPN
two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:BAK33877.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Micr
scnpilot_cont_500_p_scaffold_629_25
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24993..25559
DNA (567bp) protein (189aa)
RNA polymerase sigma factor n=3 Tax=Amycolatopsis mediterranei RepID=D8I877_AMYMU
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:AEK39874.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (s
scnpilot_cont_500_p_scaffold_629_26
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25556..26314)
DNA (759bp) protein (253aa)
Transcriptional regulator, IclR family n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KCM7_SACES
IclR family transcriptional regulator {ECO:0000313|EMBL:KJY43223.1}; TaxID=1609106 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL
Hypothetical protein
scnpilot_cont_500_p_scaffold_629_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26373..28481
DNA (2109bp) protein (703aa)
malate synthase (EC:2.3.3.9)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
malate synthase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF2DA rbh
scnpilot_cont_500_p_scaffold_629_28
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28501..28929)
DNA (429bp) protein (143aa)
endoribonuclease L-PSP n=1 Tax=Salinispora pacifica RepID=UPI00036E77A5
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABP52809.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA
scnpilot_cont_500_p_scaffold_629_29
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28951..29484
DNA (534bp) protein (178aa)
GCN5-related N-acetyltransferase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WG27_ACTMD
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACU39791.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (str
scnpilot_cont_500_p_scaffold_629_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29723..31405
DNA (1683bp) protein (561aa)
SSS sodium solute transporter superfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Y5_PSEUX rbh
SSS sodium solute transporter superfamily protein
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:AEA25837.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
Displaying items 1-30 of 70 in total

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