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scnpilot_cont_500_p_scaffold_642

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_642_1
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..438
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q3P5_KRIFD
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB35917.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM
scnpilot_cont_500_p_scaffold_642_2
unknown

Not on your lists

comp(439..966)
DNA (528bp) protein (176aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_642_3
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1075..1341)
DNA (267bp) protein (89aa)
UPF0225 protein B446_08670 n=1 Tax=Streptomyces collinus Tu 365 RepID=S5UNE9_STRCU
hypothetical protein
UPF0225 protein B446_08670 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365
scnpilot_cont_500_p_scaffold_642_4
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1473..2093
DNA (621bp) protein (207aa)
translation factor Sua5 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE3BE rbh
hypothetical protein
Translation factor {ECO:0000313|EMBL:EWM12313.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
scnpilot_cont_500_p_scaffold_642_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2238..3128
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0B1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25767.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_642_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3178..4764
DNA (1587bp) protein (529aa)
Peptide chain release factor 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPM8_PSEUX rbh
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudono
scnpilot_cont_500_p_scaffold_642_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4784..5305
DNA (522bp) protein (174aa)
OHCU decarboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CML9_PSEUX
OHCU decarboxylase
OHCU decarboxylase {ECO:0000313|EMBL:AEA24003.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_642_8
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5302..5610
DNA (309bp) protein (103aa)
5-hydroxyisourate hydrolase n=1 Tax=Saccharomonospora halophila RepID=UPI00037532A7
transthyretin Tax=RBG_16_Actinobacteria_68_21_curated
5-hydroxyisourate hydrolase
scnpilot_cont_500_p_scaffold_642_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5614..6474
DNA (861bp) protein (287aa)
urate oxidase (EC:1.7.3.3)
Uricase {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455}; EC=1.7.3.3 {ECO:0000256|PIRNR:PIRNR000241, ECO:0000256|RuleBase:RU004455};; Urate oxidase {ECO:0000256|PIRNR:PIRNR000241}; TaxID
Uricase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CML7_PSEUX rbh
scnpilot_cont_500_p_scaffold_642_10
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6461..7576)
DNA (1116bp) protein (372aa)
Mandelate racemase/muconate lactonizing enzyme n=3 Tax=Amycolatopsis mediterranei RepID=G0G2D2_AMYMS rbh
mandelate racemase/muconate lactonizing enzyme
Mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:AEK44844.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatop
scnpilot_cont_500_p_scaffold_642_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8163..9506
DNA (1344bp) protein (448aa)
S-adenosylhomocysteine deaminase (EC:3.5.4.28)
S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:AEA23996.1}; EC=3.5.4.28 {ECO:0000313|EMBL:AEA23996.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
S-adenosylhomocysteine deaminase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CML2_PSEUX rbh
scnpilot_cont_500_p_scaffold_642_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9514..9930
DNA (417bp) protein (139aa)
AIG2 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CML0_PSEUX
AIG2 family protein
AIG2 family protein {ECO:0000313|EMBL:AEA23994.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_642_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9927..11246
DNA (1320bp) protein (440aa)
allantoinase (EC:3.5.2.5)
Allantoinase {ECO:0000313|EMBL:AEA23993.1}; EC=3.5.2.5 {ECO:0000313|EMBL:AEA23993.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="
Allantoinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMK9_PSEUX rbh
scnpilot_cont_500_p_scaffold_642_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11243..12232
DNA (990bp) protein (330aa)
allantoicase (EC:3.5.3.4)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; TaxID=675635 species="Bacteria; A
Probable allantoicase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMK8_PSEUX rbh
scnpilot_cont_500_p_scaffold_642_15
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12715..14034)
DNA (1320bp) protein (440aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQK6_MODMB
hypothetical protein
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CCH85669.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter ma
scnpilot_cont_500_p_scaffold_642_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14288..15109
DNA (822bp) protein (274aa)
uridine monophosphate kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE908 rbh
aspartate/glutamate/uridylate kinase
Aspartate/glutamate/uridylate kinase {ECO:0000313|EMBL:ABJ07818.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rho
scnpilot_cont_500_p_scaffold_642_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15106..15909
DNA (804bp) protein (268aa)
Aspartate/glutamate/uridylate kinase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IE12_AZOC5 rbh
aspartate/glutamate/uridylate kinase
Aspartate/glutamate/uridylate kinase {ECO:0000313|EMBL:BAF89020.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhiz
scnpilot_cont_500_p_scaffold_642_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15922..17280)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ44_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27240.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_642_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17443..18777
DNA (1335bp) protein (445aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRE4_PSEUX rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA25235.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_642_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18727..19692)
DNA (966bp) protein (322aa)
pseudouridylate synthase n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036486B5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHH99697.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_cont_500_p_scaffold_642_21
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19714..20610)
DNA (897bp) protein (299aa)
Putative DNA-binding protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JRP5_STREN rbh
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:AEW97934.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain
scnpilot_cont_500_p_scaffold_642_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20703..21005)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0X9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25831.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_642_23
unknown

Not on your lists

21044..21376
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_642_24
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21397..22725)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003720DF3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADD39889.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM
scnpilot_cont_500_p_scaffold_642_25
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22834..23952
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00036B9CC5 rbh
ROK family protein
ROK family protein {ECO:0000313|EMBL:ACQ79928.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DS
scnpilot_cont_500_p_scaffold_642_26
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23916..24113)
DNA (198bp) protein (66aa)
Two-component system, regulatory protein {ECO:0000313|EMBL:EAP98400.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649
scnpilot_cont_500_p_scaffold_642_27
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

24174..24326
DNA (153bp) protein (51aa)
Alpha amylase catalytic region n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q460_KRIFD
alpha-glucosidase
Tax=BJP_08E140C01_Actinomycetales_70_11
scnpilot_cont_500_p_scaffold_642_28
unknown

Not on your lists

comp(24452..24697)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_642_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25083..25844)
DNA (762bp) protein (254aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRI9_PSEUX rbh
5-formyltetrahydrofolate cyclo-ligase
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:AEA26197.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
scnpilot_cont_500_p_scaffold_642_30
Mycobacterium gilvum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25841..26635)
DNA (795bp) protein (265aa)
Putative oxidoreductase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3UWD3_9ACTO
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP47071.1}; TaxID=350054 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gilvu
Displaying items 1-30 of 37 in total

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