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scnpilot_cont_500_p_scaffold_688

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_688_1
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

384..950
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037B9424
Uncharacterized protein {ECO:0000313|EMBL:EWT00502.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
hypothetical protein
scnpilot_cont_500_p_scaffold_688_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

989..1504
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CCD13 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK35129.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
scnpilot_cont_500_p_scaffold_688_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1519..1929)
DNA (411bp) protein (137aa)
CBS domain containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX10_PSEUX
CBS domain-containing protein
CBS domain containing protein {ECO:0000313|EMBL:AEA24641.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_688_4
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1926..5321)
DNA (3396bp) protein (1132aa)
ABC transporter ATPase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627926 rbh
ABC transporter ATPase {ECO:0000313|EMBL:KDN18750.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
fused ATPase and permease components of ABC transport system rbh
scnpilot_cont_500_p_scaffold_688_5
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5318..6358)
DNA (1041bp) protein (347aa)
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:CEL13293.1}; EC=1.10.3.- {ECO:0000313|EMBL:CEL13293.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiace
cytochrome C oxidase assembly protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627927 rbh
cydB; cytochrome bd-I oxidase subunit II rbh
scnpilot_cont_500_p_scaffold_688_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6372..7799)
DNA (1428bp) protein (476aa)
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035C7124 rbh
Cytochrome bd-I oxidase subunit I {ECO:0000313|EMBL:EOD70261.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancores
cytochrome bd-I oxidase subunit I rbh
scnpilot_cont_500_p_scaffold_688_7
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8084..9781
DNA (1698bp) protein (566aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDFCF rbh
Histidine kinase {ECO:0000313|EMBL:KFZ81558.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
dosT2; Hypoxia sensor histidine kinase response regulator DosT rbh
scnpilot_cont_500_p_scaffold_688_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9789..10751)
DNA (963bp) protein (321aa)
Nitroreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKK5_PSEUX rbh
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEA22975.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_688_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10851..11501)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKL1_PSEUX rbh
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA22981.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
scnpilot_cont_500_p_scaffold_688_10
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11659..12648
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FCF0_SACEN
hypothetical protein
Nitroreductase {ECO:0000313|EMBL:EQD83897.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
scnpilot_cont_500_p_scaffold_688_11
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12659..13402)
DNA (744bp) protein (248aa)
Putative ribosomal subunit interface protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5PDD1_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH97526.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_cont_500_p_scaffold_688_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13637..14620)
DNA (984bp) protein (328aa)
Nitroreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX09_PSEUX
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEA24640.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_688_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14617..15642)
DNA (1026bp) protein (342aa)
Nitroreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKK7_PSEUX rbh
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AEA22977.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_688_14
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15958..16650
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237ADB7 rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDY58013.2}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 2
scnpilot_cont_500_p_scaffold_688_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16662..18338)
DNA (1677bp) protein (559aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWU8_PSEUX
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:AEA23850.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
scnpilot_cont_500_p_scaffold_688_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18622..19863
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLX7_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22325.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_688_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19863..20597
DNA (735bp) protein (245aa)
CobB/CobQ domain protein glutamine amidotransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLX8_PSEUX
CobB/CobQ domain-containing protein glutamine amidotransferase
CobB/CobQ domain protein glutamine amidotransferase {ECO:0000313|EMBL:AEA22326.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
scnpilot_cont_500_p_scaffold_688_18
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20646..20831
DNA (186bp) protein (62aa)
Membrane protein {ECO:0000313|EMBL:KII17048.1}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter sp. S26.;"
scnpilot_cont_500_p_scaffold_688_19
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20849..21256)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035EBCFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJF16234.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxida
scnpilot_cont_500_p_scaffold_688_20
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21894..22778)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00035D5878 rbh
Acid phosphatase {ECO:0000313|EMBL:EWT04668.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
phosphoesterase
scnpilot_cont_500_p_scaffold_688_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22867..23475
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFQ5_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78016.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700
scnpilot_cont_500_p_scaffold_688_22
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23460..24548
DNA (1089bp) protein (363aa)
beta-lactamase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3C0C4 rbh
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADP84599.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_688_23
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24562..24924
DNA (363bp) protein (121aa)
extradiol dioxygenase n=1 Tax=Streptomyces vitaminophilus RepID=UPI00037C4526
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIS02315.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
scnpilot_cont_500_p_scaffold_688_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24921..25202)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ41_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27237.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_688_25
Karlodinium veneficum, Karlodinium, Gymnodiniales, Dinophyceae, Eukaryota

Not on your lists

25247..25603
DNA (357bp) protein (119aa)
14-3-3-like protein n=1 Tax=Karlodinium veneficum RepID=A7YXW5_KARVE
14-3-3-like protein {ECO:0000313|EMBL:ABV22244.1}; TaxID=407301 species="Eukaryota; Alveolata; Dinophyceae; Gymnodiniales; Kareniaceae; Karlodinium.;" source="Karlodinium veneficum (Dinoflagellate) (K
14-3-3 protein ; K06630 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein
scnpilot_cont_500_p_scaffold_688_26
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26209..27036)
DNA (828bp) protein (276aa)
Aliphatic amidase AmiE {ECO:0000313|EMBL:EWC58843.1}; EC=3.5.1.4 {ECO:0000313|EMBL:EWC58843.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora
apolipoprotein N- acyltransferase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268F8 rbh
hydrolase, carbon-nitrogen family
scnpilot_cont_500_p_scaffold_688_27
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27127..27639)
DNA (513bp) protein (171aa)
DsrE family protein n=1 Tax=Actinoplanes globisporus RepID=UPI00038073E0 rbh
DsrE family protein rbh
DsrE family protein {ECO:0000313|EMBL:AIJ23735.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_688_28
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27627..29048)
DNA (1422bp) protein (474aa)
FAD-dependent oxidoreductase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268FD rbh
monooxygenase rbh
Monooxygenase {ECO:0000313|EMBL:AIJ23733.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_688_29
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29208..29999)
DNA (792bp) protein (264aa)
Methyltransferase-UbiE family protein n=1 Tax=Streptomyces sp. AA4 RepID=D9UVB3_9ACTO rbh
Methyltransferase-UbiE family protein {ECO:0000313|EMBL:EFL06129.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;
type 11 methyltransferase
scnpilot_cont_500_p_scaffold_688_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30013..30843)
DNA (831bp) protein (277aa)
NLP/P60 protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNL3_PSEUX
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AEA28311.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
Displaying items 1-30 of 38 in total

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