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scnpilot_cont_500_p_scaffold_771

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_771_1
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
excinuclease ABC subunit C n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC15
uvrC; excinuclease, UvrABC system protein C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
scnpilot_cont_500_p_scaffold_771_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

467..1189
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYH3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25613.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_771_3
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1200..1925)
DNA (726bp) protein (242aa)
Putative HAD superfamily hydrolase {ECO:0000313|EMBL:KID30287.1}; EC=3.8.1.2 {ECO:0000313|EMBL:KID30287.1};; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pra
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYH4_PSEUX
haloacid dehalogenase
scnpilot_cont_500_p_scaffold_771_4
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1995..2969)
DNA (975bp) protein (325aa)
pyrD; dihydroorotate dehydrogenase (EC:1.3.98.1) rbh
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:CAM01442.1}; EC=1.3.3.1 {ECO:0000313|EMBL:CAM01442.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopo
dihydroorotate dehydrogenase n=1 Tax=Actinopolyspora halophila RepID=UPI000380D2BF rbh
scnpilot_cont_500_p_scaffold_771_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3060..3965)
DNA (906bp) protein (302aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRD9_PARL1
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABS62472.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavame
scnpilot_cont_500_p_scaffold_771_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3972..4430)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYH5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25615.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_771_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4427..4927)
DNA (501bp) protein (167aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDCF
ribH; riboflavin synthase subunit beta
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
scnpilot_cont_500_p_scaffold_771_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4932..6248)
DNA (1317bp) protein (439aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYH7_PSEUX rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoc
scnpilot_cont_500_p_scaffold_771_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6245..6874)
DNA (630bp) protein (210aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:AEA25618.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AEA25618.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseu
Riboflavin synthase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYH8_PSEUX
scnpilot_cont_500_p_scaffold_771_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6963..7649)
DNA (687bp) protein (229aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseu
Ribulose-phosphate 3-epimerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYI0_PSEUX rbh
scnpilot_cont_500_p_scaffold_771_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7668..9149)
DNA (1482bp) protein (494aa)
Fmu (Sun) domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYI1_PSEUX rbh
Fmu (Sun) domain-containing protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:AEA25621.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_771_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9172..12816)
DNA (3645bp) protein (1215aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=675635 species="Ba
Primosomal protein N' (Replication factor Y)-superfamily II helicase-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYI4_PSEUX rbh
primosomal protein N'
scnpilot_cont_500_p_scaffold_771_13
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13468..15225
DNA (1758bp) protein (586aa)
Glycosyl transferase family 2 n=1 Tax=Frankia sp. CN3 RepID=G6HA70_9ACTO rbh
family 2 glycosyl transferase protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADL47164.1}; Flags: Precursor;; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromo
scnpilot_cont_500_p_scaffold_771_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15222..16316
DNA (1095bp) protein (365aa)
Beta-mannanase-like protein n=1 Tax=Frankia sp. CN3 RepID=G6HA71_9ACTO rbh
beta-mannanase-like protein rbh
Beta-mannanase-like protein {ECO:0000313|EMBL:ADP82603.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_771_15
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16421..18430
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000380B60C rbh
Ser/Thr protein kinase
Transmembrane serine/threonine protein kinase D {ECO:0000313|EMBL:ADI10865.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
scnpilot_cont_500_p_scaffold_771_16
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18427..20235
DNA (1809bp) protein (603aa)
Heat shock protein 70 n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LS35_9ACTO
Heat shock protein 70
Heat shock protein 70 {ECO:0000313|EMBL:AGL18494.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_cont_500_p_scaffold_771_17
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20226..21014
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI000366C47F
Uncharacterized protein {ECO:0000313|EMBL:ERI35449.2}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_771_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21018..22244)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LN81_9ACTO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL17164.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_cont_500_p_scaffold_771_19
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

22335..23438
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003743143
hypothetical protein Tax=RBG_16_Actinobacteria_68_21_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_771_20
unknown

Not on your lists

23678..24637
DNA (960bp) protein (320aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_771_21
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24535..25689)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LPI2_9ACTO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGL17160.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_cont_500_p_scaffold_771_22
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25697..26344)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LJE9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL17161.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_cont_500_p_scaffold_771_23
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26341..28605)
DNA (2265bp) protein (755aa)
Polysaccharide biosynthesis protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LCM2_9ACTO rbh
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AGL17162.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-
scnpilot_cont_500_p_scaffold_771_24
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28608..30080)
DNA (1473bp) protein (491aa)
Polysaccharide biosynthesis protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LCM2_9ACTO
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AGL17162.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-
scnpilot_cont_500_p_scaffold_771_25
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30086..31996)
DNA (1911bp) protein (637aa)
Galactosyltransferase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LFH0_9ACTO rbh
galactosyltransferase
Galactosyltransferase {ECO:0000313|EMBL:AGL17163.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_cont_500_p_scaffold_771_26
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32119..32823)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S9XWI7_STRA9
Uncharacterized protein {ECO:0000313|EMBL:EXU85676.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_771_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33186..34289)
DNA (1104bp) protein (368aa)
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Q5_PSEUX rbh
scnpilot_cont_500_p_scaffold_771_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34544..35140
DNA (597bp) protein (199aa)
SH3 type 3 domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYI9_PSEUX
SH3 type 3 domain-containing protein
SH3 type 3 domain protein {ECO:0000313|EMBL:AEA25629.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
scnpilot_cont_500_p_scaffold_771_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35268..36506)
DNA (1239bp) protein (413aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AEA25691.1}; EC=6.3.2.5 {ECO:0000313|EMBL:AEA25691.1};; TaxID=675635 species="Bacteria; Actinobacteria;
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZG0_PSEUX rbh
scnpilot_cont_500_p_scaffold_771_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36512..36793)
DNA (282bp) protein (94aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZG1_PSEUX
DNA-directed RNA polymerase subunit omega
Displaying items 1-30 of 57 in total

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