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scnpilot_cont_500_p_scaffold_779

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_779_1
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1358)
DNA (1356bp) protein (452aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;"
Sensor histidine kinase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PVD6_9PSEU rbh
histidine kinase
scnpilot_cont_500_p_scaffold_779_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1367..3025)
DNA (1659bp) protein (553aa)
chemotaxis protein CheY n=1 Tax=Amycolatopsis methanolica RepID=UPI000374A553 rbh
trxB; thioredoxin reductase rbh
Thioredoxin reductase {ECO:0000313|EMBL:AIJ24434.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_779_3
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3454..4140
DNA (687bp) protein (229aa)
binding-protein-dependent transporter inner membrane component n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE030
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABV97515.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;
scnpilot_cont_500_p_scaffold_779_4
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4133..5242
DNA (1110bp) protein (370aa)
glycine/betaine ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE031 rbh
glycine betaine/carnitin ABC transporter ATP-binding protein
Glycine betaine/carnitin ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJE81428.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="S
scnpilot_cont_500_p_scaffold_779_5
Corynebacterium matruchotii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5239..6027
DNA (789bp) protein (263aa)
quaternary amine ABC transporter permease n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE032
ABC transporter, permease protein {ECO:0000313|EMBL:EEG26355.1}; TaxID=566549 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium matru
ABC transporter permease
scnpilot_cont_500_p_scaffold_779_6
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6051..7025
DNA (975bp) protein (325aa)
glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE033 rbh
Glycine betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJV02816.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodoc
L-proline glycine betaine binding ABC transporter protein ProX / Osmotic adaptation
scnpilot_cont_500_p_scaffold_779_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7111..7875)
DNA (765bp) protein (255aa)
trans-aconitate 2-methyltransferase (EC:2.1.1.144)
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:AEA26604.1}; EC=2.1.1.144 {ECO:0000313|EMBL:AEA26604.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; P
Trans-aconitate 2-methyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN4_PSEUX rbh
scnpilot_cont_500_p_scaffold_779_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7902..8423)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26605.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_779_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8440..10302)
DNA (1863bp) protein (621aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=675635 species="Bacteria; Actinobacter
DNA primase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN6_PSEUX rbh
DNA primase
scnpilot_cont_500_p_scaffold_779_10
unknown

Not on your lists

comp(10313..10498)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_779_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10601..11569)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE753 rbh
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:BAL97302.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain
scnpilot_cont_500_p_scaffold_779_12
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11611..12468
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RAT3_9BIFI rbh
Excalibur domain containing protein {ECO:0000313|EMBL:KFI48835.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bi
hypothetical protein
scnpilot_cont_500_p_scaffold_779_13
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12521..12940
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037FD425
MerR family transcriptional regulator {ECO:0000313|EMBL:KJR06280.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
MerR family transcriptional regulator
scnpilot_cont_500_p_scaffold_779_14
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12962..13543)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XUX2_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EME53015.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44
Conserved putative secreted protein
scnpilot_cont_500_p_scaffold_779_15
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13629..14054
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036CA648
Acetyltransferase {ECO:0000313|EMBL:EDX23078.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
putative acetyltransferase
scnpilot_cont_500_p_scaffold_779_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14008..15237)
DNA (1230bp) protein (410aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYP3_PSEUX rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
scnpilot_cont_500_p_scaffold_779_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15234..15923)
DNA (690bp) protein (230aa)
hypothetical protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF29E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26614.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_779_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15920..16942)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYP5_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26615.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_779_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17289..18620
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ2_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26622.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_779_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18617..19612
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ3_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26623.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_779_21
unknown

Not on your lists

19695..19895
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF12
scnpilot_cont_500_p_scaffold_779_22
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19896..20675
DNA (780bp) protein (260aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:KFF98489.1}; EC=1.1.1.69 {ECO:0000313|EMBL:KFF98489.1};; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;"
Gluconate 5-dehydrogenase n=1 Tax=Streptomyces sp. e14 RepID=D6K8Q1_9ACTO rbh
gluconate dehydrogenase
scnpilot_cont_500_p_scaffold_779_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20677..22074)
DNA (1398bp) protein (466aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ4_PSEUX rbh
glycyl-tRNA synthetase
scnpilot_cont_500_p_scaffold_779_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22133..23200)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0B0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25766.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_779_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23217..23537)
DNA (321bp) protein (107aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ7_PSEUX
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AEA26627.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
scnpilot_cont_500_p_scaffold_779_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23593..23949
DNA (357bp) protein (119aa)
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYQ8_PSEUX
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEA26628.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_779_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23946..24344
DNA (399bp) protein (133aa)
Fur family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECAC
Fur family ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:AEA26629.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_779_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24408..25043
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26633.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_779_29
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25087..25302)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FEE2_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB46208.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
scnpilot_cont_500_p_scaffold_779_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25317..25706)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26631.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
Displaying items 1-30 of 33 in total

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