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scnpilot_cont_500_p_scaffold_790

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_790_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..578
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0L6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27815.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_790_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

584..1705
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY13_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24254.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_790_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2133..2612
DNA (480bp) protein (160aa)
Cation diffusion facilitator family transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL97_PSEUX
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEA25939.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
scnpilot_cont_500_p_scaffold_790_4
unknown

Not on your lists

2688..2828
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_790_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3148..3939)
DNA (792bp) protein (264aa)
ABC-2 type transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYF1_PSEUX rbh
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:AEA25591.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
scnpilot_cont_500_p_scaffold_790_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3936..4763)
DNA (828bp) protein (276aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase {ECO:0000313|EMBL:AEA25590.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AEA25590.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar
Fe(3+)-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYF0_PSEUX rbh
scnpilot_cont_500_p_scaffold_790_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4881..6449)
DNA (1569bp) protein (523aa)
Mannosyltransferase MptB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE9_PSEUX rbh
mannosyltransferase
Mannosyltransferase MptB {ECO:0000313|EMBL:AEA25589.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_790_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6515..7363
DNA (849bp) protein (283aa)
Transcriptional regulator, ArsR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE8_PSEUX rbh
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEA25588.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
scnpilot_cont_500_p_scaffold_790_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7347..8774
DNA (1428bp) protein (476aa)
FeS assembly protein SufB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE7_PSEUX rbh
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:AEA25587.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_790_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8771..9946
DNA (1176bp) protein (392aa)
FeS assembly protein SufD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE6_PSEUX rbh
FeS assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:AEA25586.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_790_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9964..10728
DNA (765bp) protein (255aa)
iron ABC transporter ATP-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDAEE rbh
Iron-sulfur cluster assembly ATPase protein SufC {ECO:0000313|EMBL:EWC64661.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actin
FeS assembly ATPase SufC
scnpilot_cont_500_p_scaffold_790_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10728..11975
DNA (1248bp) protein (416aa)
SufS subfamily cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=675635 species="Bacteria; Actinob
Cysteine desulfurase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE4_PSEUX rbh
scnpilot_cont_500_p_scaffold_790_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11982..12434
DNA (453bp) protein (151aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE3_PSEUX
NifU family SUF system FeS assembly protein
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:AEA25583.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
scnpilot_cont_500_p_scaffold_790_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12431..12817
DNA (387bp) protein (129aa)
metal-sulfur cluster biosynthesis protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB1B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25582.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_790_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12885..13673)
DNA (789bp) protein (263aa)
Arylamine N-acetyltransferase n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2VA10_9NOCA
N-acetyltransferase
N-acetyltransferase {ECO:0000313|EMBL:AHG88491.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_cont_500_p_scaffold_790_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13708..14673)
DNA (966bp) protein (322aa)
guanylate cyclase (EC:4.6.1.1) rbh
Adenylate/guanylate cyclase {ECO:0000313|EMBL:AEA25581.1}; EC=4.6.1.1 {ECO:0000313|EMBL:AEA25581.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar
guanylate cyclase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB1D rbh
scnpilot_cont_500_p_scaffold_790_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14747..15196)
DNA (450bp) protein (150aa)
universal stress protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB1E
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEA25580.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_790_18
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15272..16438)
DNA (1167bp) protein (389aa)
Lycopene cyclase (CrtL-type) n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1THM8_MYCVP rbh
Lycopene cyclase family protein {ECO:0000313|EMBL:CDQ42385.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
lycopene cyclase family protein
scnpilot_cont_500_p_scaffold_790_19
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16610..18031
DNA (1422bp) protein (474aa)
dGTPase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K9G4_SACES rbh
deoxyguanosinetriphosphate triphosphohydrolase
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:AHH97108.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria alb
scnpilot_cont_500_p_scaffold_790_20
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18420..19211)
DNA (792bp) protein (264aa)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DX71_COREQ rbh
putative oxidoreductase, SDR family rbh
Putative oxidoreductase, SDR family {ECO:0000313|EMBL:AHH18938.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
scnpilot_cont_500_p_scaffold_790_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19339..20970
DNA (1632bp) protein (544aa)
ABC transporter related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYD8_PSEUX rbh
ABC transporter related protein {ECO:0000313|EMBL:AEA25578.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
ABC transporter
scnpilot_cont_500_p_scaffold_790_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21295..21504
DNA (210bp) protein (70aa)
Transcriptional regulator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYD7_PSEUX
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEA25577.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_790_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21535..22344
DNA (810bp) protein (270aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYD6_PSEUX rbh
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA25576.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_790_24
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22528..23454
DNA (927bp) protein (309aa)
ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF340
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EWC61026.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actin
ABC transporter
scnpilot_cont_500_p_scaffold_790_25
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23451..24347
DNA (897bp) protein (299aa)
ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF340
ABC transporter {ECO:0000313|EMBL:KDN16967.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
lipid A export permease/ATP-binding protein MsbA
scnpilot_cont_500_p_scaffold_790_26
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24418..24864
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037EADAA
MarR family transcriptional regulator {ECO:0000313|EMBL:EME64909.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-3
MarR family transcriptional regulator
scnpilot_cont_500_p_scaffold_790_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24919..25305)
DNA (387bp) protein (129aa)
globin n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB7E
Uncharacterized protein {ECO:0000313|EMBL:EMA47232.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
scnpilot_cont_500_p_scaffold_790_28
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25407..25994)
DNA (588bp) protein (196aa)
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF343
TetR family transcriptional regulator {ECO:0000313|EMBL:KGI82124.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_790_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26093..27394
DNA (1302bp) protein (434aa)
Glutamate/cysteine ligase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYD3_PSEUX rbh
glutamate/cysteine ligase protein
Glutamate/cysteine ligase family protein {ECO:0000313|EMBL:AEA25573.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
scnpilot_cont_500_p_scaffold_790_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27391..28701
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYD2_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25572.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
Displaying items 1-30 of 52 in total

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