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scnpilot_cont_500_p_scaffold_840

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_840_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..312
DNA (312bp) protein (104aa)
Cytochrome b/b6 domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL25_PSEUX
cytochrome b/b6 domain-containing protein
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:AEA24954.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_840_2
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

704..1729
DNA (1026bp) protein (342aa)
F420-dependent oxidoreductase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003660DF8 rbh
Luciferase {ECO:0000313|EMBL:EDY54709.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
putative oxidoreductase
scnpilot_cont_500_p_scaffold_840_3
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1731..2588)
DNA (858bp) protein (286aa)
galE; NAD-dependent epimerase/dehydratase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CCH87682.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CCH87682.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae;
UDP-glucose 4-epimerase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3B8C0 rbh
scnpilot_cont_500_p_scaffold_840_4
unknown

Not on your lists

2635..2733
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_840_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2789..3067
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL23_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24952.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_840_6
unknown

Not on your lists

comp(2962..3237)
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_840_7
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3312..3551
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LEH8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL15461.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_cont_500_p_scaffold_840_8
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3553..5322)
DNA (1770bp) protein (590aa)
acyl-CoA dehydrogenase n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI0003740F7A rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EFF89223.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
acyl-CoA dehydrogenase
scnpilot_cont_500_p_scaffold_840_9
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5332..6267)
DNA (936bp) protein (312aa)
Brp-like protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDM9_GEOOG
Uncharacterized protein {ECO:0000313|EMBL:KGI70243.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
brp-like protein
scnpilot_cont_500_p_scaffold_840_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6478..7326
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0002F52970 rbh
Xanthorhodopsin {ECO:0000313|EMBL:AJW80239.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
Bacteriorhodopsin
scnpilot_cont_500_p_scaffold_840_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7400..9028)
DNA (1629bp) protein (543aa)
phosphoglucomutase, alpha-D-glucose phosphate-specific (EC:5.4.2.2)
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:AEA25818.1}; EC=5.4.2.2 {ECO:0000313|EMBL:AEA25818.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseu
Phosphoglucomutase, alpha-D-glucose phosphate-specific n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0W6_PSEUX rbh
scnpilot_cont_500_p_scaffold_840_12
unknown

Not on your lists

9243..9413
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_840_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9474..10487)
DNA (1014bp) protein (338aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA23_MICTS rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ75853.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain St
scnpilot_cont_500_p_scaffold_840_14
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10484..11077)
DNA (594bp) protein (198aa)
haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Streptomyces acidiscabies RepID=UPI000287A403
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:EHR63809.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Ps
haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED
scnpilot_cont_500_p_scaffold_840_15
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11182..11988
DNA (807bp) protein (269aa)
Serine/threonine protein phosphatase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YAX4_9PSEU
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AJK55880.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurid
scnpilot_cont_500_p_scaffold_840_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11989..12381)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPS1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26104.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_840_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12572..15814
DNA (3243bp) protein (1081aa)
exodeoxyribonuclease V subunit gamma (EC:3.1.11.5)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRH2_PSEUX rbh
scnpilot_cont_500_p_scaffold_840_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15811..19125
DNA (3315bp) protein (1105aa)
exodeoxyribonuclease V subunit beta (EC:3.1.11.5)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; Exonuclease V subunit RecB {ECO:0000256|HAMA
Exodeoxyribonuclease V, beta subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRH3_PSEUX rbh
scnpilot_cont_500_p_scaffold_840_19
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19122..20951
DNA (1830bp) protein (610aa)
recD; exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V alpha chain n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XLC2_MICPN rbh
scnpilot_cont_500_p_scaffold_840_20
unknown

Not on your lists

comp(20970..21194)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0X0_PSEUX
hypothetical protein
scnpilot_cont_500_p_scaffold_840_21
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21315..22226)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI0003828133
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM16778.1}; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain D
scnpilot_cont_500_p_scaffold_840_22
unknown

Not on your lists

22411..22890
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_840_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22928..23896)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPS4_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26107.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_840_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23904..27230)
DNA (3327bp) protein (1109aa)
Exonuclease SbcC n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPS6_PSEUX rbh
exonuclease SbcC
Exonuclease SbcC {ECO:0000313|EMBL:AEA26109.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
scnpilot_cont_500_p_scaffold_840_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27230..28399)
DNA (1170bp) protein (390aa)
Nuclease SbcCD, D subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPS7_PSEUX rbh
nuclease SbcCD subunit D
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:AEA26110.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_840_26
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28430..28867)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000363E32B
Uncharacterized protein {ECO:0000313|EMBL:ETK37709.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
scnpilot_cont_500_p_scaffold_840_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28963..30729)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPT4_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26117.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_840_28
unknown

Not on your lists

30741..31880
DNA (1140bp) protein (380aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_840_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31961..32728
DNA (768bp) protein (256aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPS5_PSEUX rbh
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA26108.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
Displaying 29 items

View Taxonomy