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scnpilot_cont_500_p_scaffold_877

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_877_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..974
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003663889 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90279.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_cont_500_p_scaffold_877_2

Not on your lists

971..1516
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000381A594
Marine sediment metagenome DNA, contig: S03H2_L00291 {ECO:0000313|EMBL:GAH35178.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Electron transport protein SCO1/SenC
scnpilot_cont_500_p_scaffold_877_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1455..1778)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037BD953
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ADB76627.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophil
scnpilot_cont_500_p_scaffold_877_4
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1958..2545)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Streptomyces sp. TOR3209 RepID=UPI0003048E80
Uncharacterized protein {ECO:0000313|EMBL:EHN73771.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;
hypothetical protein
scnpilot_cont_500_p_scaffold_877_5
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2747..3766)
DNA (1020bp) protein (340aa)
Acyltransferase 3 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21EG5_SACD2
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:ABD82914.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degrad
scnpilot_cont_500_p_scaffold_877_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3905..4603
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037583D7 rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB73535.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;"
scnpilot_cont_500_p_scaffold_877_7
unknown

Not on your lists

comp(4592..4813)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_877_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4813..5760)
DNA (948bp) protein (316aa)
universal stress protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDEC9
universal stress protein
Universal stress protein {ECO:0000313|EMBL:AIJ23136.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;
scnpilot_cont_500_p_scaffold_877_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5912..6928
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:AHH97001.1}; EC=1.2.1.12 {ECO:0000313|EMBL:AHH97001.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiace
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00037D6DAE rbh
scnpilot_cont_500_p_scaffold_877_10
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6931..8592)
DNA (1662bp) protein (554aa)
UPI0003D04364 related cluster n=1 Tax=unknown RepID=UPI0003D04364 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ESZ89050.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
acyl-CoA dehydrogenase
scnpilot_cont_500_p_scaffold_877_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8659..9219
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6E9
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEA26379.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Ps
scnpilot_cont_500_p_scaffold_877_12
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9255..11942)
DNA (2688bp) protein (896aa)
Aldehyde oxidase and xanthine dehydrogenase domains protein (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase domains protein n=1 Tax=Streptomyces sp. e14 RepID=D6KEJ0_9ACTO rbh
Aldehyde oxidase and xanthine dehydrogenase domains protein {ECO:0000313|EMBL:EFF89495.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="
scnpilot_cont_500_p_scaffold_877_13
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11939..12712)
DNA (774bp) protein (258aa)
FAD-binding molybdopterin dehydrogenase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000373A451 rbh
FAD-binding molybdopterin dehydrogenase {ECO:0000313|EMBL:KIF72155.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH
Oxidoreductase
scnpilot_cont_500_p_scaffold_877_14
unknown

Not on your lists

comp(12810..13289)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037BE5EA
scnpilot_cont_500_p_scaffold_877_15
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13401..14366)
DNA (966bp) protein (322aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Streptomyces somaliensis RepID=UPI00029A8785 rbh
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABW16124.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
scnpilot_cont_500_p_scaffold_877_16
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14478..14909)
DNA (432bp) protein (144aa)
Iron-regulated LSR2 protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VFZ7_9ACTO
Iron-regulated LSR2 protein {ECO:0000313|EMBL:EFL10351.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
lysyl tRNA synthetase-like protein
scnpilot_cont_500_p_scaffold_877_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15096..16361
DNA (1266bp) protein (422aa)
serine/threonine protein kinase (EC:2.7.11.25)
Serine/threonine protein kinase {ECO:0000313|EMBL:AEA26397.1}; EC=2.7.11.25 {ECO:0000313|EMBL:AEA26397.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000373CAC8 rbh
scnpilot_cont_500_p_scaffold_877_18
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16392..16829
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036A9EFF
putative ABC transporter
ABC transporter {ECO:0000313|EMBL:KGH45288.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
scnpilot_cont_500_p_scaffold_877_19
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16726..17946)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QNN3_9PSEU rbh
Uncharacterized protein {ECO:0000313|EMBL:CEL14372.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
membrane protein
scnpilot_cont_500_p_scaffold_877_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18022..19563)
DNA (1542bp) protein (514aa)
Mannosyltransferase MptB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE9_PSEUX
mannosyltransferase
Mannosyltransferase MptB {ECO:0000313|EMBL:AEA25589.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_877_21
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20029..20754
DNA (726bp) protein (242aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0G212_AMYMS
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG79161.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
scnpilot_cont_500_p_scaffold_877_22
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20789..21541
DNA (753bp) protein (251aa)
ANTAR domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVL3_FRASU
ANTAR domain-containing protein
ANTAR domain protein {ECO:0000313|EMBL:ADP82519.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_877_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21601..22944
DNA (1344bp) protein (448aa)
Protein serine/threonine phosphatase with GAF(S) sensor(S) n=1 Tax=Frankia sp. CN3 RepID=G6HDL0_9ACTO
SpoIIE-like protein with GAF domain {ECO:0000313|EMBL:EXG79221.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum D
protein serine phosphatase with GAF(s) sensor(s)
scnpilot_cont_500_p_scaffold_877_24
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23112..23486)
DNA (375bp) protein (125aa)
anti-sigma factor antagonist n=1 Tax=Mycobacterium hassiacum RepID=UPI000372F9CD
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacu
anti-sigma-factor antagonist
scnpilot_cont_500_p_scaffold_877_25
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23816..24211
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000373E2FE
SPG23_c1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29238.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_877_26
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24192..25748
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036F5D48 rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KIC68955.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
diguanylate cyclase/phosphodiesterase
scnpilot_cont_500_p_scaffold_877_27
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25726..27213)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0M4_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM80670.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
hypothetical protein
scnpilot_cont_500_p_scaffold_877_28
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27215..28471)
DNA (1257bp) protein (419aa)
Cytochrome P450 family protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUX9_SACES
Cytochrome P450 family protein
Cytochrome P450 family protein {ECO:0000313|EMBL:CCH31645.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis
scnpilot_cont_500_p_scaffold_877_29
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28674..29477
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000370CAC1
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACL38237.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain AT
scnpilot_cont_500_p_scaffold_877_30
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29618..30214)
DNA (597bp) protein (199aa)
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE3A
Transcriptional regulator {ECO:0000313|EMBL:EXG79215.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;
Putative transcriptional regulator, TetR-family
Displaying items 1-30 of 42 in total

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