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scnpilot_cont_500_p_scaffold_891

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_891_1
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..594)
DNA (594bp) protein (198aa)
Integrase family protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WRJ4_ACTMD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACU35246.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC
scnpilot_cont_500_p_scaffold_891_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(972..1574)
DNA (603bp) protein (201aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi
Oligoribonuclease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNF6_PSEUX rbh
oligoribonuclease
scnpilot_cont_500_p_scaffold_891_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1605..3146
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNF5_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27179.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_891_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3112..4668)
DNA (1557bp) protein (519aa)
Membrane-flanked domain DUF304 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNF4_PSEUX rbh
hypothetical protein
Membrane-flanked domain DUF304 {ECO:0000313|EMBL:AEA27178.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_891_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4665..5168)
DNA (504bp) protein (168aa)
Membrane-flanked domain DUF304 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNF3_PSEUX
hypothetical protein
Membrane-flanked domain DUF304 {ECO:0000313|EMBL:AEA27177.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_891_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5334..6479)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNF2_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27176.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_891_7
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6490..7344)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEFBC
Sucrase {ECO:0000313|EMBL:EHK86191.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_891_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7370..8917)
DNA (1548bp) protein (516aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEA27175.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEA27175.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
O-succinylbenzoate--CoA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNF1_PSEUX rbh
scnpilot_cont_500_p_scaffold_891_9
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8959..9402)
DNA (444bp) protein (148aa)
Membrane protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LPC0_9ACTO
membrane protein
Membrane protein {ECO:0000313|EMBL:AGL17519.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
scnpilot_cont_500_p_scaffold_891_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9493..11589)
DNA (2097bp) protein (699aa)
Glycosyl transferase family 39 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE8_PSEUX rbh
glycosyl transferase protein
Glycosyl transferase family 39 {ECO:0000313|EMBL:AEA27172.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_891_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11586..12947)
DNA (1362bp) protein (454aa)
Glycosyl transferase family 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE7_PSEUX rbh
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA27171.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_891_12
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12944..14956)
DNA (2013bp) protein (671aa)
Glycosyl transferase, family 39 n=2 Tax=Frankia sp. (strain CcI3) RepID=Q2JG86_FRASC
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KDA43346.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frank
glycosyl transferase
scnpilot_cont_500_p_scaffold_891_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15275..16735)
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE3_PSEUX rbh
histidine kinase
scnpilot_cont_500_p_scaffold_891_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16739..17500)
DNA (762bp) protein (254aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE2_PSEUX rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA27166.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
scnpilot_cont_500_p_scaffold_891_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17665..18444
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RVT5_BLASD
Uncharacterized protein {ECO:0000313|EMBL:KHK99939.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_891_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18502..18897)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24226.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_891_17
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19049..19990
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003785D60 rbh
Esterase/lipase {ECO:0000313|EMBL:KID30167.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
esterase
scnpilot_cont_500_p_scaffold_891_18
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19987..21579
DNA (1593bp) protein (531aa)
FAD dependent oxidoreductase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VY70_9ACTO rbh
Cyclohexanone monooxygenase {ECO:0000313|EMBL:KGI80206.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea
FAD dependent oxidoreductase rbh
scnpilot_cont_500_p_scaffold_891_19
unknown

Not on your lists

comp(21513..21644)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_891_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21681..22325
DNA (645bp) protein (215aa)
GntR family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VUR5_9ACTO
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AGZ39475.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuli
scnpilot_cont_500_p_scaffold_891_21
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22336..23490
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037AFE3C rbh
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETZ40676.1}; TaxID=1335421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;"
acyl-CoA dehydrogenase
scnpilot_cont_500_p_scaffold_891_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23530..24201)
DNA (672bp) protein (224aa)
FAD-binding 9 siderophore-interacting domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE1_PSEUX rbh
FAD-binding 9 siderophore-interacting domain-containing protein
FAD-binding 9 siderophore-interacting domain protein {ECO:0000313|EMBL:AEA27165.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
scnpilot_cont_500_p_scaffold_891_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24325..24924)
DNA (600bp) protein (200aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNE0_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA27164.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_891_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24992..27370
DNA (2379bp) protein (793aa)
4-hydroxyacetophenone monooxygenase (EC:1.14.13.84)
4-hydroxyacetophenone monooxygenase {ECO:0000313|EMBL:AEA27163.1}; EC=1.14.13.84 {ECO:0000313|EMBL:AEA27163.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
4-hydroxyacetophenone monooxygenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEFC5 rbh
scnpilot_cont_500_p_scaffold_891_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28173..29114
DNA (942bp) protein (314aa)
Amine oxidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CND7_PSEUX rbh
amine oxidase
Amine oxidase {ECO:0000313|EMBL:AEA27161.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_891_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29111..30487
DNA (1377bp) protein (459aa)
D-lactate dehydrogenase (EC:1.1.2.4)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEA27160.1}; EC=1.1.2.4 {ECO:0000313|EMBL:AEA27160.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Ps
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CND6_PSEUX rbh
scnpilot_cont_500_p_scaffold_891_27
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30552..31958
DNA (1407bp) protein (469aa)
acyl-CoA synthetase n=1 Tax=Streptomyces sp. SS RepID=UPI0002E0EB4E rbh
Putative fatty acid synthase {ECO:0000313|EMBL:EWC58163.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora sphecios
fadD36; fatty-acyl-CoA synthase
scnpilot_cont_500_p_scaffold_891_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31988..33472
DNA (1485bp) protein (495aa)
CHAD domain containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CND5_PSEUX rbh
CHAD domain-containing protein
CHAD domain containing protein {ECO:0000313|EMBL:AEA27159.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
scnpilot_cont_500_p_scaffold_891_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33505..34524
DNA (1020bp) protein (340aa)
PHP domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CND4_PSEUX rbh
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:AEA27158.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_891_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34632..35552
DNA (921bp) protein (307aa)
glycoside hydrolase family protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF052 rbh
glycoside hydrolase protein
Glycoside hydrolase family 16 {ECO:0000313|EMBL:AEA28182.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
Displaying items 1-30 of 53 in total

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