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scnpilot_cont_500_p_scaffold_892

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_892_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..517
DNA (516bp) protein (172aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX3_PSEUX
hemerythrin HHE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:AEA24228.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoca
scnpilot_cont_500_p_scaffold_892_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(558..3809)
DNA (3252bp) protein (1084aa)
Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX2_PSEUX rbh
winged helix family transcriptional regulator
Transcriptional regulator, putative ATPase, winged helix family {ECO:0000313|EMBL:AEA24227.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
scnpilot_cont_500_p_scaffold_892_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3806..5254)
DNA (1449bp) protein (483aa)
VWA containing CoxE family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW8_PSEUX rbh
von Willebrand factor A
VWA containing CoxE family protein {ECO:0000313|EMBL:AEA24223.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_892_4
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5370..6059
DNA (690bp) protein (230aa)
chemotaxis protein CheY n=1 Tax=Actinokineospora enzanensis RepID=UPI000367A7AD rbh
Putative two-component system response regulator {ECO:0000313|EMBL:CEL23386.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibd
phosphate regulon transcription regulatory protein PhoB
scnpilot_cont_500_p_scaffold_892_5
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6056..7054
DNA (999bp) protein (333aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;"
Two-component system, sensor histidine kinase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K381_SACES rbh
Two-component system, sensor histidine kinase
scnpilot_cont_500_p_scaffold_892_6
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7084..8595
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WC64_9ACTO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGZ46744.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
scnpilot_cont_500_p_scaffold_892_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8598..9317
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036D37B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ90936.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
scnpilot_cont_500_p_scaffold_892_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9310..10185)
DNA (876bp) protein (292aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW7_PSEUX rbh
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AEA24222.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
scnpilot_cont_500_p_scaffold_892_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10232..10642)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE7DE
Uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:AHK28956.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
scnpilot_cont_500_p_scaffold_892_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10798..12948
DNA (2151bp) protein (717aa)
ATP-dependent DNA helicase, RecQ family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW6_PSEUX rbh
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:AEA24221.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
scnpilot_cont_500_p_scaffold_892_11
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12958..13389
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FLI1_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK41565.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
scnpilot_cont_500_p_scaffold_892_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13367..14590)
DNA (1224bp) protein (408aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:AEA24220.1}; EC=2.1.1.77 {ECO:0000313|EMBL:AEA24220.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Ps
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW5_PSEUX rbh
scnpilot_cont_500_p_scaffold_892_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14735..15850)
DNA (1116bp) protein (372aa)
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
Glutamate 5-kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW4_PSEUX rbh
scnpilot_cont_500_p_scaffold_892_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15857..17392)
DNA (1536bp) protein (512aa)
GTPase Obg n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW3_PSEUX rbh
GTPase obg
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudono
scnpilot_cont_500_p_scaffold_892_15
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17466..17744)
DNA (279bp) protein (93aa)
50S ribosomal protein L27 n=1 Tax=Streptomyces sp. AA4 RepID=D9V955_9ACTO
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
LSU ribosomal protein L27p
scnpilot_cont_500_p_scaffold_892_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17759..18067)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW1_PSEUX
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
scnpilot_cont_500_p_scaffold_892_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18201..20141)
DNA (1941bp) protein (647aa)
Ribonuclease, Rne/Rng family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW0_PSEUX rbh
ribonuclease, Rne/Rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:AEA24215.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
scnpilot_cont_500_p_scaffold_892_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21087..21890)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV9_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24214.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_892_19
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22047..23276
DNA (1230bp) protein (410aa)
alanine racemase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE89D rbh
D-amino acid deaminase {ECO:0000313|EMBL:CDO33587.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="M
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_892_20
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23303..24256)
DNA (954bp) protein (318aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00037603D0 rbh
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGN28931.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoell
TRAP transporter solute receptor, TAXI family
scnpilot_cont_500_p_scaffold_892_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24490..26001
DNA (1512bp) protein (504aa)
Amino acid permease-associated region n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XFA0_NAKMY rbh
amino acid permease-associated protein rbh
Amino acid permease-associated region {ECO:0000313|EMBL:ACV77986.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (s
scnpilot_cont_500_p_scaffold_892_22
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26046..27890
DNA (1845bp) protein (615aa)
Histidine kinase n=1 Tax=Williamsia sp. D3 RepID=V8CY65_9ACTO rbh
Histidine kinase {ECO:0000313|EMBL:ETD32112.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_892_23
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(27949..31680)
DNA (3732bp) protein (1244aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000378A348 rbh
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
scnpilot_cont_500_p_scaffold_892_24
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31754..32197)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000375E073
Uncharacterized protein {ECO:0000313|EMBL:EWY38300.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
conserved hypothetical protein
scnpilot_cont_500_p_scaffold_892_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32406..33194)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMM8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24012.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_892_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33242..33730)
DNA (489bp) protein (163aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV8_PSEUX
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA24213.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
scnpilot_cont_500_p_scaffold_892_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33723..35660)
DNA (1938bp) protein (646aa)
Fe-S oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE36E rbh
Radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:AEA24212.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
scnpilot_cont_500_p_scaffold_892_28
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35753..36634
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037573C3 rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EOD64687.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancores
alpha/beta hydrolase
scnpilot_cont_500_p_scaffold_892_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36701..37576)
DNA (876bp) protein (292aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVN6_PSEUX rbh
dihydrodipicolinate synthase
scnpilot_cont_500_p_scaffold_892_30
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37679..39871
DNA (2193bp) protein (731aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LAN9_FRASN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABW13814.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
Displaying items 1-30 of 68 in total

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