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scnpilot_cont_500_p_scaffold_898

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_898_1
unknown

Not on your lists

comp(100..471)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_898_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(684..1154)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE086
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23203.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_898_3
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1393..2592
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSL9_BLASD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG01770.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
scnpilot_cont_500_p_scaffold_898_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2934..4271
DNA (1338bp) protein (446aa)
PhoH family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY5_PSEUX rbh
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AEA23205.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_898_5
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4333..4737)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RLE2_FRAAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ61662.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
scnpilot_cont_500_p_scaffold_898_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4745..6184)
DNA (1440bp) protein (480aa)
IMP dehydrogenase (EC:1.1.1.205)
IMP dehydrogenase family protein {ECO:0000313|EMBL:AEA23206.1}; EC=1.1.1.205 {ECO:0000313|EMBL:AEA23206.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseu
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE08A rbh
scnpilot_cont_500_p_scaffold_898_7
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6336..6926
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036E6551
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU38910.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC
scnpilot_cont_500_p_scaffold_898_8
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6923..10066
DNA (3144bp) protein (1048aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000371011C rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL86470.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
scnpilot_cont_500_p_scaffold_898_9
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10136..10630
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF00F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS05923.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BA
scnpilot_cont_500_p_scaffold_898_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10638..12155)
DNA (1518bp) protein (506aa)
DNA ligase (EC:6.5.1.1)
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=675635 species="Ba
Probable DNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY8_PSEUX rbh
scnpilot_cont_500_p_scaffold_898_11
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12296..12796)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SD91_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76440.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
scnpilot_cont_500_p_scaffold_898_12
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12859..13815
DNA (957bp) protein (319aa)
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YUR9_NOCFA rbh
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAD58072.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10
scnpilot_cont_500_p_scaffold_898_13
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13812..14783)
DNA (972bp) protein (324aa)
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT n=1 Tax=Streptomyces sp. C RepID=D9VMT7_9ACTO
spermidine/putrescine ABC transporter ATP-binding protein
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJF63406.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="St
scnpilot_cont_500_p_scaffold_898_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14780..15568)
DNA (789bp) protein (263aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IZL3_FRASU
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP83931.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia
scnpilot_cont_500_p_scaffold_898_15
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15565..16470)
DNA (906bp) protein (302aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IZL4_FRASU
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP83932.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia
scnpilot_cont_500_p_scaffold_898_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16467..17606)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037AAA53 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETK31453.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_898_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17691..18875)
DNA (1185bp) protein (395aa)
Diguanylate phosphodiesterase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY9_PSEUX rbh
diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AEA23209.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_898_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18937..20337)
DNA (1401bp) protein (467aa)
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=675635 species="Bacteria; Actin
Fumarate hydratase class II n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ0_PSEUX rbh
scnpilot_cont_500_p_scaffold_898_19
unknown

Not on your lists

comp(20391..20528)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_898_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20694..21359)
DNA (666bp) protein (222aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ1_PSEUX
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEA23211.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Ps
scnpilot_cont_500_p_scaffold_898_21
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21496..22575)
DNA (1080bp) protein (360aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
fructose 1,6-bisphosphatase n=1 Tax=Actinokineospora enzanensis RepID=UPI000362565E rbh
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora sphecio
scnpilot_cont_500_p_scaffold_898_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22703..23311
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23213.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_898_23
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

23406..23774
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4310F
protein of unknown function DUF1905
Tax=BJP_IG2069_Anaerolineales_43_63
scnpilot_cont_500_p_scaffold_898_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24039..24254)
DNA (216bp) protein (72aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ4_PSEUX
exodeoxyribonuclease 7 small subunit
scnpilot_cont_500_p_scaffold_898_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24269..25513)
DNA (1245bp) protein (415aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ5_PSEUX rbh
exodeoxyribonuclease 7 large subunit
scnpilot_cont_500_p_scaffold_898_26
Gordonia otitidis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25510..26070)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TP70_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB35278.1}; TaxID=1108044 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia otitidis NBRC 100426.;"
hypothetical protein
Displaying 26 items

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