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scnpilot_cont_500_p_scaffold_960

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_960_1
unknown

Not on your lists

105..272
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_960_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(493..1536)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUH2_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25362.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_960_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1529..2884)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUH3_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25363.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_960_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3173..4120
DNA (948bp) protein (316aa)
Pantothenate kinase (EC:2.7.1.33)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:000025
Pantothenate kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUH5_PSEUX rbh
scnpilot_cont_500_p_scaffold_960_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4180..4644
DNA (465bp) protein (155aa)
Regulatory protein MarR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUH6_PSEUX
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEA25366.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_960_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4641..5435)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUH7_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25367.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_960_7
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5568..7445)
DNA (1878bp) protein (626aa)
asparagine synthase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE077 rbh
Asparagine synthase {ECO:0000313|EMBL:ESY79354.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNH
asnH; hypothetical protein
scnpilot_cont_500_p_scaffold_960_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7610..8044
DNA (435bp) protein (145aa)
regulatory protein MarR n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE078
MarR family transcriptional regulator
Probable transcriptional regulator protein, MarR family protein {ECO:0000313|EMBL:ADZ69720.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum g
scnpilot_cont_500_p_scaffold_960_9
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8234..8644)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Rhodococcus erythropolis RepID=C0ZPH3_RHOE4
hypothetical protein
Glyoxalase {ECO:0000313|EMBL:EQM35306.1}; TaxID=1381122 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1.;"
scnpilot_cont_500_p_scaffold_960_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8698..11073)
DNA (2376bp) protein (792aa)
ABC transporter related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVX1_PSEUX rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEA25456.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_960_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11079..11516)
DNA (438bp) protein (146aa)
AraC family transcriptional regulator n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HDY9_STRA9
AraC family transcriptional regulator {ECO:0000313|EMBL:ETK37792.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp.
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_960_12
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11599..12771
DNA (1173bp) protein (391aa)
Lactate 2-monooxygenase {ECO:0000313|EMBL:CEL21503.1}; EC=1.13.12.4 {ECO:0000313|EMBL:CEL21503.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporan
putative lactate 2-monooxygenase PB1A11.03 (EC:1.13.12.4)
L-lactate 2-monooxygenase n=1 Tax=Streptomyces RepID=UPI00037CAED1 rbh
scnpilot_cont_500_p_scaffold_960_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12850..14631
DNA (1782bp) protein (594aa)
Serine/threonine protein kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUH8_PSEUX rbh
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AEA25368.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_960_14
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14812..15489
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Veillonella sp. ACP1 RepID=J5AKY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJO50620.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
scnpilot_cont_500_p_scaffold_960_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15685..16440)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUH9_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25369.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_960_16
Mycobacterium indicus pranii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16695..17045)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003722541
deazaflavin-dependent nitroreductase family protein
Cell entry (Mce) related family protein {ECO:0000313|EMBL:AFS16576.1}; TaxID=1232724 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex
scnpilot_cont_500_p_scaffold_960_17
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17098..17772)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUE4_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31465.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
scnpilot_cont_500_p_scaffold_960_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17884..18516
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUI0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25370.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_960_19
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18523..18942)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000364BAEE
Uncharacterized protein {ECO:0000313|EMBL:KJY16972.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_960_20
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18986..19804
DNA (819bp) protein (273aa)
AraC family transcriptional regulator n=3 Tax=Amycolatopsis mediterranei RepID=D8I246_AMYMU rbh
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AEK39337.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis medit
scnpilot_cont_500_p_scaffold_960_21
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19863..20303)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TBJ8_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG92577.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
scnpilot_cont_500_p_scaffold_960_22
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20428..21456
DNA (1029bp) protein (343aa)
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003802694 rbh
Aldo/keto reductase {ECO:0000313|EMBL:KJK10050.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
aldo/keto reductase
scnpilot_cont_500_p_scaffold_960_23
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21485..21838
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDDB6
Putative uncharacterized protein {ECO:0000313|EMBL:EDY64275.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespira
scnpilot_cont_500_p_scaffold_960_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21835..22407
DNA (573bp) protein (191aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6Q8_PSEUX
filamentation induced by cAMP protein Fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:AEA28952.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
scnpilot_cont_500_p_scaffold_960_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22536..23720)
DNA (1185bp) protein (395aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRL7_PSEUX rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26225.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_960_26
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23717..24373)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI0003682B75
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AJC56033.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.
scnpilot_cont_500_p_scaffold_960_27
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24558..24920
DNA (363bp) protein (121aa)
Anti-sigma factor antagonist n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ERT9_9NOCA
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
anti sigma factor antagonist
scnpilot_cont_500_p_scaffold_960_28
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24960..25055)
DNA (96bp) protein (32aa)
Putative transposase {ECO:0000313|EMBL:EJI93524.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
Displaying 28 items

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