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scnpilot_cont_500_p_scaffold_3045

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_3045_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..637
DNA (636bp) protein (212aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU4_PSEUX rbh
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA22903.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_3045_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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682..981
DNA (300bp) protein (100aa)
Prevent-host-death family protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8E0_GEOOG
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ADB73562.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus o
scnpilot_cont_500_p_scaffold_3045_3
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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978..1370
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FQ05_ISOV2
PilT protein domain-containing protein
scnpilot_cont_500_p_scaffold_3045_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1427..2551)
DNA (1125bp) protein (375aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU2_PSEUX rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA22901.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_3045_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2533..3483)
DNA (951bp) protein (317aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Translation initiation factor, aIF-2BI family {ECO:0000313|EMBL:AEA22900.1}; EC=5.3.1.23 {ECO:0000313|EMBL:AEA22900.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocard
Translation initiation factor, aIF-2BI family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU1_PSEUX rbh
scnpilot_cont_500_p_scaffold_3045_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3593..4198
DNA (606bp) protein (202aa)
AIG2 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU0_PSEUX
AIG2 family protein
AIG2 family protein {ECO:0000313|EMBL:AEA22899.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_3045_7
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4276..5613
DNA (1338bp) protein (446aa)
amino acid transporter n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626D6E rbh
general substrate transporter
General substrate transporter {ECO:0000313|EMBL:ADD40663.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (stra
scnpilot_cont_500_p_scaffold_3045_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5680..6777)
DNA (1098bp) protein (366aa)
Amidohydrolase 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTT8_PSEUX rbh
amidohydrolase
Amidohydrolase 2 {ECO:0000313|EMBL:AEA22897.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
scnpilot_cont_500_p_scaffold_3045_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6781..8466)
DNA (1686bp) protein (562aa)
60 kDa chaperonin n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTT7_PSEUX rbh
molecular chaperone GroEL
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_3045_10
Pseudonocardia sp. TY-7, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8580..8954)
DNA (375bp) protein (125aa)
Propane monooxygenase coupling protein n=1 Tax=Pseudonocardia sp. TY-7 RepID=Q08KD9_9PSEU
Propane monooxygenase coupling protein {ECO:0000313|EMBL:BAF34307.1}; TaxID=373039 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia sp
monooxygenase component MmoB/DmpM
scnpilot_cont_500_p_scaffold_3045_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8951..10147)
DNA (1197bp) protein (399aa)
Methane/phenol/toluene hydroxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTT5_PSEUX rbh
methane/phenol/toluene hydroxylase
Methane/phenol/toluene hydroxylase {ECO:0000313|EMBL:AEA22894.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_3045_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10144..11211)
DNA (1068bp) protein (356aa)
ferredoxin--NAD(+) reductase (EC:1.18.1.3) rbh
Ferredoxin--NAD(+) reductase {ECO:0000313|EMBL:AEA22893.1}; EC=1.18.1.3 {ECO:0000313|EMBL:AEA22893.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoc
Ferredoxin--NAD(+) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTT4_PSEUX rbh
scnpilot_cont_500_p_scaffold_3045_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11321..11527)
DNA (207bp) protein (69aa)
methane monooxygenase (EC:1.14.13.25)
Methane monooxygenase {ECO:0000313|EMBL:AEA22892.1}; EC=1.14.13.25 {ECO:0000313|EMBL:AEA22892.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia
Methane monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTT3_PSEUX
Displaying 13 items

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