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scnpilot_cont_500_p_scaffold_3278

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_3278_1
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..749
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Rhodococcus RepID=C1BC97_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EID79085.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 132
scnpilot_cont_500_p_scaffold_3278_2
Propionibacterium sp. oral taxon 192, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(782..1195)
DNA (414bp) protein (138aa)
Two-component system, OmpR family, response regulator RegX3 n=1 Tax=Propionibacterium sp. oral taxon 192 str. F0372 RepID=S3YE34_9ACTO
Two-component system, OmpR family, response regulator RegX3 {ECO:0000313|EMBL:EPH06755.1}; TaxID=1203605 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium
XRE family transcriptional regulator
scnpilot_cont_500_p_scaffold_3278_3
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1195..2070)
DNA (876bp) protein (292aa)
phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein, PhoT family n=1 Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TF77_MYCSR
Phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKH83795.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces s
scnpilot_cont_500_p_scaffold_3278_4
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2152..3060)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00036D32FA
Phosphate ABC transporter {ECO:0000313|EMBL:CQD24498.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
phosphate ABC transporter permease
scnpilot_cont_500_p_scaffold_3278_5
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3060..4061)
DNA (1002bp) protein (334aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q240_STANL
Phosphate ABC transporter permease {ECO:0000313|EMBL:CDO91634.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
phosphate ABC transporter permease
scnpilot_cont_500_p_scaffold_3278_6
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4194..5378)
DNA (1185bp) protein (395aa)
Phosphate-binding protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PRA3_9FIRM
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; Flags: Precursor;; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobact
phosphate ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_3278_7
unknown

Not on your lists

5805..6107
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3278_8
Gordonia amicalis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6432..6863
DNA (432bp) protein (144aa)
Putative transposase n=1 Tax=Gordonia amicalis NBRC 100051 = JCM 11271 RepID=L7L4V8_9ACTO
Putative transposase {ECO:0000313|EMBL:GAC55077.1}; TaxID=1220574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amicalis NBRC 100051 = JCM 11271.;"
tnpA; transposase
scnpilot_cont_500_p_scaffold_3278_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6822..7316)
DNA (495bp) protein (165aa)
glyoxalase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED50
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA23170.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
scnpilot_cont_500_p_scaffold_3278_10
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7418..7864
DNA (447bp) protein (149aa)
ArsR family transcriptional regulator n=1 Tax=Amycolatopsis alba RepID=UPI000381257F
arsR; ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AEK39267.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis medit
scnpilot_cont_500_p_scaffold_3278_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7861..8940
DNA (1080bp) protein (360aa)
Arsenical-resistance protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVQ2_PSEUX rbh
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AEA24612.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
scnpilot_cont_500_p_scaffold_3278_12
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8996..9658
DNA (663bp) protein (221aa)
putative arsenate reductase (EC:1.20.4.1) rbh
phosphotyrosine protein phosphatase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDCDB
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:KDQ00610.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
scnpilot_cont_500_p_scaffold_3278_13
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9678..9809
DNA (132bp) protein (44aa)
heat-shock protein HtpX n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003651FF4
Arsenate reductase {ECO:0000313|EMBL:EMD30208.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
ptpB; protein-tyrosine phosphatase, low molecular weight
scnpilot_cont_500_p_scaffold_3278_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9993..10991
DNA (999bp) protein (333aa)
arsenite S-adenosylmethyltransferase n=1 Tax=Patulibacter americanus RepID=UPI0003B3ACAB rbh
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADB49026.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter w
scnpilot_cont_500_p_scaffold_3278_15
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10911..11927)
DNA (1017bp) protein (339aa)
Periplasmic molybdate-binding protein n=1 Tax=Frankia sp. QA3 RepID=I8QKV9_9ACTO rbh
Periplasmic molybdate-binding protein {ECO:0000313|EMBL:EIV93012.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
XRE family transcriptional regulator
scnpilot_cont_500_p_scaffold_3278_16
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12158..13324
DNA (1167bp) protein (389aa)
Sugar phosphate permease n=1 Tax=Frankia sp. QA3 RepID=I9KFX3_9ACTO rbh
Sugar phosphate permease {ECO:0000313|EMBL:EIV93013.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
major facilitator superfamily protein rbh
scnpilot_cont_500_p_scaffold_3278_17
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13853..14281)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Mycobacterium avium RepID=UPI0003189320
Uncharacterized protein {ECO:0000313|EMBL:KKB97453.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycob
scnpilot_cont_500_p_scaffold_3278_18
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14418..15632)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037F73C4
Sugar (And other) transporter family protein {ECO:0000313|EMBL:EUA14200.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
MFS transporter
scnpilot_cont_500_p_scaffold_3278_19
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15629..18097)
DNA (2469bp) protein (823aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Copper/silver-translocating P-type ATPase n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8G9B2_9PSEU rbh
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:EHY87497.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomon
scnpilot_cont_500_p_scaffold_3278_20
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18094..18318)
DNA (225bp) protein (75aa)
Copper chaperone n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8G9B1_9PSEU
Copper chaperone {ECO:0000313|EMBL:EHY87496.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
heavy metal transport/detoxification protein
scnpilot_cont_500_p_scaffold_3278_21
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18460..18885
DNA (426bp) protein (142aa)
MerR family transcriptional regulator n=1 Tax=Sciscionella marina RepID=UPI000380F528
Putative transcriptional regulator {ECO:0000313|EMBL:EHY87495.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora
MerR family transcriptional regulator
scnpilot_cont_500_p_scaffold_3278_22
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18933..21926)
DNA (2994bp) protein (998aa)
transposase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE6A rbh
Transposase {ECO:0000313|EMBL:KKC04333.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
transposase Tn3 rbh
scnpilot_cont_500_p_scaffold_3278_23
unknown

Not on your lists

22236..22718
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3278_24
unknown

Not on your lists

comp(22684..23619)
DNA (936bp) protein (312aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3278_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24710..24952
DNA (243bp) protein (81aa)
transcriptional regulator n=1 Tax=Actinopolyspora mortivallis RepID=UPI00036933DB
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_3278_26
unknown

Not on your lists

24983..25294
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3278_27
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25643..26431
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00036A0C31
Uncharacterized protein {ECO:0000313|EMBL:KGI80633.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
Bifunctional DNA primase/polymerase
scnpilot_cont_500_p_scaffold_3278_28
unknown

Not on your lists

26428..26655
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3278_29
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26652..28187
DNA (1536bp) protein (512aa)
Type III restriction enzyme, res subunit n=8 Tax=Mycobacterium abscessus RepID=I8CNC1_MYCAB rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH73699.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
helicase
Displaying 29 items

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