ggKbase home page

scnpilot_cont_500_p_scaffold_3381

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_3381_1
unknown

Not on your lists

comp(663..1061)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3381_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1134..1580)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626E63
hsp18; heat shock protein
Heat shock protein {ECO:0000313|EMBL:AIJ25606.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_cont_500_p_scaffold_3381_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1748..2170
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Amycolatopsis mediterranei (strain S699) RepID=G0FMF2_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK42692.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
scnpilot_cont_500_p_scaffold_3381_4
unknown

Not on your lists

comp(2581..2955)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3381_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3417..4388)
DNA (972bp) protein (324aa)
DNA ligase D n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNA3_PSEUX
DNA ligase D
DNA ligase D {ECO:0000313|EMBL:AEA27127.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 5
scnpilot_cont_500_p_scaffold_3381_6
unknown

Not on your lists

4553..4831
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3381_7
unknown

Not on your lists

comp(4819..5052)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3381_8
unknown

Not on your lists

comp(5007..5768)
DNA (762bp) protein (254aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3381_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6206..6853)
DNA (648bp) protein (216aa)
LuxR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B7A26D
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB75205.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source=
scnpilot_cont_500_p_scaffold_3381_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6841..8637)
DNA (1797bp) protein (599aa)
histidine kinase n=1 Tax=Glaciibacter superstes RepID=UPI0003B63DFA rbh
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:ADB75204.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geoder
scnpilot_cont_500_p_scaffold_3381_11
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8884..10395
DNA (1512bp) protein (504aa)
Possible glycine rich protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SG23_RHOSR
glycine rich protein
Possible glycine rich protein {ECO:0000313|EMBL:ABG93513.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
scnpilot_cont_500_p_scaffold_3381_12
unknown

Not on your lists

comp(10582..10701)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3381_13
unknown

Not on your lists

10770..11012
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3381_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11004..11933)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00037151BA
integrase protein
Integrase family protein {ECO:0000313|EMBL:AEA28191.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_3381_15
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12515..13552
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000376785C
transposase, IS4
Transposase, IS4 family {ECO:0000313|EMBL:KDA41184.1}; TaxID=683305 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
scnpilot_cont_500_p_scaffold_3381_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13583..14755
DNA (1173bp) protein (391aa)
Cytochrome P450 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ57_PSEUX rbh
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:AEA24761.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
scnpilot_cont_500_p_scaffold_3381_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14760..15653)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ56_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24760.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_3381_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15821..16240
DNA (420bp) protein (140aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSJ7_PSEUX
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEA23707.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
Displaying 18 items

View Taxonomy