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scnpilot_cont_500_p_scaffold_3419

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_3419_1
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
Putative transposase {ECO:0000313|EMBL:EJI93524.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
scnpilot_cont_500_p_scaffold_3419_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95..688)
DNA (594bp) protein (198aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFECEE
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEA28746.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
scnpilot_cont_500_p_scaffold_3419_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1101..1481
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28747.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_3419_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1459..1932)
DNA (474bp) protein (158aa)
Integral membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU2_PSEUX
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:AEA28748.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
scnpilot_cont_500_p_scaffold_3419_5
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2136..2420
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KID28607.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
scnpilot_cont_500_p_scaffold_3419_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2950..5229)
DNA (2280bp) protein (760aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEA28749.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEA28749.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
Peptidoglycan glycosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU3_PSEUX
scnpilot_cont_500_p_scaffold_3419_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5509..5928)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28750.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_3419_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6070..6642
DNA (573bp) protein (191aa)
Transcriptional regulator, PadR-like family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU5_PSEUX
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEA28751.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
scnpilot_cont_500_p_scaffold_3419_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6635..7708
DNA (1074bp) protein (358aa)
Inositol 1-phosphate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU6_PSEUX rbh
inositol 1-phosphate synthase
Inositol 1-phosphate synthase {ECO:0000313|EMBL:AEA28752.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_3419_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8500..8670
DNA (171bp) protein (57aa)
NLP/P60 protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU7_PSEUX
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AEA28753.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_3419_11
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8795..9490
DNA (696bp) protein (232aa)
Short-chain alcohol dehydrogenase n=1 Tax=Saccharomonospora glauca K62 RepID=I1D885_9PSEU rbh
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:EIF01160.1}; Flags: Precursor;; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="
short-chain dehydrogenase/reductase SDR
scnpilot_cont_500_p_scaffold_3419_12
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9391..10719)
DNA (1329bp) protein (443aa)
acyl-CoA dehydrogenase n=1 Tax=Rhodococcus rhodochrous RepID=UPI0002F503E5 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KEI45590.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.
acyl-CoA dehydrogenase
scnpilot_cont_500_p_scaffold_3419_13
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10813..11394
DNA (582bp) protein (194aa)
Transcriptional regulator, TetR family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A5K4_THECD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACY96364.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospo
scnpilot_cont_500_p_scaffold_3419_14
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11391..12710
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000372C9F2 rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KEI45591.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora re
putative aminoglycoside phosphotransferase rbh
scnpilot_cont_500_p_scaffold_3419_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12871..13638
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28754.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_3419_16
unknown

Not on your lists

13635..14054
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_3419_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14070..16919)
DNA (2850bp) protein (950aa)
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=675635 species="Bacteria; Actinob
Leucine--tRNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXV0_PSEUX rbh
scnpilot_cont_500_p_scaffold_3419_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17099..17566
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEB96
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28757.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_3419_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17736..18242)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037E2389
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ75270.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
scnpilot_cont_500_p_scaffold_3419_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18299..18796)
DNA (498bp) protein (166aa)
UPF0301 protein Psed_6670 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXV2_PSEUX
hypothetical protein
UPF0301 protein Psed_6670 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
Displaying 20 items

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