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scnpilot_cont_500_p_scaffold_280_48

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(46540..47034)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIX4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 162.0
  • Bit_score: 269
  • Evalue 1.90e-69
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 162.0
  • Bit_score: 269
  • Evalue 5.20e-70
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=675635 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 162.0
  • Bit_score: 269
  • Evalue 2.60e-69

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGACCGTGACGGACACGCAGGAGAGCTGGCTGACCCAAGAGGCCTACGACCGGCTCAAGGGTGAGTTGGACGGCCTGATCGCCAACCGCCCCGTCATCGCGGCCGAGATCAACGCCCGTCGCGAGGAGGGCGACCTCAAGGAGAACGGCGGCTACCACGCCGCCCGCGAGGAGCAGGGCCAGCAGGAGGGCCGTATCCGCCAGCTGCAGGAGCTGCTGCGCACGGCCAAGGTCGGCGTCGCTCCCACCACCTCCGACACCGCCTCGCCGGGCATGGTCCTCAAGCTGCGCTACGAGGGCGACGACGACACCGAGACGGTGCTGCTGGGTTCCCGCGAGGAGGGCAGCCGGGGCGACCTGGAGGTCATCTCGCCCAACTCCCCGCTCGGCGCCGCGCTGCTCGGCGCGCACACCGGCGACACGCGGGAGTACCCGCTGCCCGACGGCGGCACGATGAAGGTCTCGCTGGTCTCCGCGGAGCCGTTCAGGGCCTGA
PROTEIN sequence
Length: 165
MTVTDTQESWLTQEAYDRLKGELDGLIANRPVIAAEINARREEGDLKENGGYHAAREEQGQQEGRIRQLQELLRTAKVGVAPTTSDTASPGMVLKLRYEGDDDTETVLLGSREEGSRGDLEVISPNSPLGAALLGAHTGDTREYPLPDGGTMKVSLVSAEPFRA*