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scnpilot_cont_500_p_scaffold_280_53

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(51642..52265)

Top 3 Functional Annotations

Value Algorithm Source
Channel protein, hemolysin III family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY0_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 207.0
  • Bit_score: 337
  • Evalue 1.20e-89
  • rbh
hemolysin III family channel protein similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 207.0
  • Bit_score: 337
  • Evalue 3.40e-90
Channel protein, hemolysin III family {ECO:0000313|EMBL:AEA23200.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 207.0
  • Bit_score: 337
  • Evalue 1.70e-89

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCGGGGCTGGCTCCACCTCTGGTCGTTCGCCGTGTCGATCGCGTCGTGCGCCACGCTGATCGCGGTGGCCGCCGCCCTCGTCGGCGGTGGCGCGGCACTGGCCGTGTCGGTGTACAGCGCCACGATCCTCGCGCTGTTCGGCACCAGTGCGCTCTACCACCGCCGTACCTGGCGCACCGCCCGGTCGCGGGCGATCATGAAGCGGCTCGACCACTCCATGATCTTCCTGTTCATCGCGGGCACCTACACGCCCGTCGCGGCGCTGGCGATGGATCCGGGCACGGCCCGGTGGGTGCTCATCACCGTGTGGACGGGGGCGTTGGCCGGCGTCGTGCTCAAGACCGCCTGGCCGCACGCCCCCGCGTGGGTCGGCGTGCCCATCTACATCGCGCTGGGCTGGGTGGCGGTCTTCGCCATCCCCGCGATGCTCGCCGGCGGTGGCGTCGCGGCGCTGGTGCTGATCCTCGTCGGAGGCGGCCTCTACACCGTGGGCGCGGTCTTCTACGGCACGAAGTGGCCGAACCCGTGGCCCCGCACCTTCGGGTACCACGAGTTCTTCCACGCGGCCACGGTGCTCGCGGCGATCTGCCACCTCGTCGCGATCTGGCTGATCCTCTTCTAG
PROTEIN sequence
Length: 208
MRGWLHLWSFAVSIASCATLIAVAAALVGGGAALAVSVYSATILALFGTSALYHRRTWRTARSRAIMKRLDHSMIFLFIAGTYTPVAALAMDPGTARWVLITVWTGALAGVVLKTAWPHAPAWVGVPIYIALGWVAVFAIPAMLAGGGVAALVLILVGGGLYTVGAVFYGTKWPNPWPRTFGYHEFFHAATVLAAICHLVAIWLILF*