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scnpilot_cont_500_p_scaffold_475_24

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 21040..21636

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV67_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 198.0
  • Bit_score: 290
  • Evalue 9.40e-76
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 198.0
  • Bit_score: 290
  • Evalue 2.60e-76
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA28613.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 198.0
  • Bit_score: 290
  • Evalue 1.30e-75

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGCCGGTGACGTGGGGGACAGCACCGACGCCGGTGGCGCCGTGGAGCAGACCCTGACGAAGCTCAGGGCCCTCGACGCGCGCCCGGCGCCCGCCGTGGCGGCGGCCCCGCGCACCCTGGCCGACCTCTACCGCGACCACCGGATGCGCATGGTCCGCCTCGCCGTCCTGCTGGTGGACGACCCCAACACGGCCGAGGACGTCGTGCAGGAGGCGTTCGCCGGCCTGCACCGCCACTGGTCGGGGCTGCGTGACGAGGAGGCCGCCATCGGCTACCTCCGCGCGGCCGTCGTCAACGGGTCGCGCTCGGTGCTGCGGCGCCGGCGCACGGCCCGCGACTACGTGCCCCCGCACCAGGTCAACGCCCGTTCCGCCGAGTCGCTGGCCATGCTCACGGCCGAGCACCAGGCCGTCGTCGACGCGCTGGCCACCCTGCCACCGCGCCAGCGCGAGGTGCTGGTGCTGCGCTACTACGGGGGGCTGTCGGAGGCCGAGATCGCCGAGGCCACCGGCATCACGCGCGGCACGGTGAAGTCCACGGCCAGCCGCGCGCTCGACGCGGTCGGCCGGGTCATGAACTCGGGTGCCGGCCGATGA
PROTEIN sequence
Length: 199
MAGDVGDSTDAGGAVEQTLTKLRALDARPAPAVAAAPRTLADLYRDHRMRMVRLAVLLVDDPNTAEDVVQEAFAGLHRHWSGLRDEEAAIGYLRAAVVNGSRSVLRRRRTARDYVPPHQVNARSAESLAMLTAEHQAVVDALATLPPRQREVLVLRYYGGLSEAEIAEATGITRGTVKSTASRALDAVGRVMNSGAGR*