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scnpilot_cont_500_p_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_475_1
Pichia kudriavzevii, Pichia, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

2..1429
DNA (1428bp) protein (476aa)
Minus agglutinin n=1 Tax=Chlamydomonas incerta RepID=Q5I2R0_CHLIN
Uncharacterized protein {ECO:0000313|EMBL:KGK35558.1}; Flags: Fragment;; TaxID=4909 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Pi
OmpA/MotB
scnpilot_cont_500_p_scaffold_475_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1434..2330)
DNA (897bp) protein (299aa)
oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEBEC rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEA28592.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
scnpilot_cont_500_p_scaffold_475_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2360..3163
DNA (804bp) protein (268aa)
NUDIX family protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEBEB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEA28593.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
scnpilot_cont_500_p_scaffold_475_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3160..3945
DNA (786bp) protein (262aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV48_PSEUX rbh
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA28594.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_475_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3982..5229)
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV49_PSEUX rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA28595.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_475_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5333..6007)
DNA (675bp) protein (225aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV50_PSEUX rbh
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEA28596.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
scnpilot_cont_500_p_scaffold_475_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6159..6410)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDED9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28597.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_475_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6559..7434
DNA (876bp) protein (292aa)
endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=675635 species="
Endonuclease III n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV52_PSEUX rbh
scnpilot_cont_500_p_scaffold_475_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7431..8090
DNA (660bp) protein (220aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV53_PSEUX
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEA28599.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca
scnpilot_cont_500_p_scaffold_475_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8087..8794
DNA (708bp) protein (236aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV54_PSEUX
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEA28600.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
scnpilot_cont_500_p_scaffold_475_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8814..10007
DNA (1194bp) protein (398aa)
Colicin V production protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV55_PSEUX rbh
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:AEA28601.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
scnpilot_cont_500_p_scaffold_475_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10219..11499)
DNA (1281bp) protein (427aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV56_PSEUX rbh
scnpilot_cont_500_p_scaffold_475_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11572..12258
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV57_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28603.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_475_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12454..12717
DNA (264bp) protein (88aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
RNA-directed DNA polymerase {ECO:0000313|EMBL:AEA25138.1}; EC=2.7.7.49 {ECO:0000313|EMBL:AEA25138.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca
RNA-directed DNA polymerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPM1_PSEUX
scnpilot_cont_500_p_scaffold_475_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12718..13380)
DNA (663bp) protein (221aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV64_PSEUX rbh
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AEA28610.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
scnpilot_cont_500_p_scaffold_475_16
unknown

Not on your lists

13438..13650
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_475_17
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13837..15405
DNA (1569bp) protein (523aa)
ATPase component of ABC transporters with duplicated ATPase domain n=1 Tax=Frankia sp. QA3 RepID=I8ZXY3_9ACTO rbh
ATPase component of ABC transporters with duplicated ATPase domain {ECO:0000313|EMBL:KJE20928.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia s
antibiotic ABC transporter ATP-binding protein rbh
scnpilot_cont_500_p_scaffold_475_18
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15448..16407)
DNA (960bp) protein (320aa)
oxidoreductase n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000369E089 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD66559.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
oxidoreductase rbh
scnpilot_cont_500_p_scaffold_475_19
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16442..17068)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JVW4_SACES
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH30121.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix esp
scnpilot_cont_500_p_scaffold_475_20
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17151..18284
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036F587C rbh
Epoxide hydrolase {ECO:0000313|EMBL:GAD83500.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
Microsomal epoxide hydrolase
scnpilot_cont_500_p_scaffold_475_21
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18534..18947)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V1G8_MYCVA
Uncharacterized protein {ECO:0000313|EMBL:EJZ08733.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_475_22
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18982..19881
DNA (900bp) protein (300aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13) Tax=RBG_16_Actinobacteria_70_17_curated
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6X3J4_PROPF rbh
scnpilot_cont_500_p_scaffold_475_23
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19936..20970)
DNA (1035bp) protein (345aa)
fba,fda; fructose-bisphosphate aldolase (EC:4.1.2.13)
fructose-bisphosphate aldolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEA97 rbh
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:KJK43487.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigen
scnpilot_cont_500_p_scaffold_475_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21040..21636
DNA (597bp) protein (199aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV67_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA28613.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
scnpilot_cont_500_p_scaffold_475_25
unknown

Not on your lists

21747..21959
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_475_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22005..22652
DNA (648bp) protein (216aa)
SNARE associated Golgi protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV69_PSEUX rbh
hypothetical protein
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEA28615.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
scnpilot_cont_500_p_scaffold_475_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22649..23716)
DNA (1068bp) protein (356aa)
Glycoside hydrolase family 76 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV71_PSEUX rbh
glycosyl hydrolase protein
Glycoside hydrolase family 76 {ECO:0000313|EMBL:AEA28617.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
scnpilot_cont_500_p_scaffold_475_28
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23805..24530
DNA (726bp) protein (242aa)
transcriptional regulator n=1 Tax=Rhodococcus opacus RepID=UPI00029CC6AD
HTH-type transcriptional regulator glxA
HTH-type transcriptional regulator glxA {ECO:0000313|EMBL:AHK30561.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.
scnpilot_cont_500_p_scaffold_475_29
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24527..24772
DNA (246bp) protein (82aa)
transcriptional regulator n=1 Tax=Rhodococcus opacus RepID=UPI00029CC6AD
HTH-type transcriptional regulator glxA
HTH-type transcriptional regulator glxA {ECO:0000313|EMBL:AHK30561.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.
scnpilot_cont_500_p_scaffold_475_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24769..25413
DNA (645bp) protein (215aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIR3_PSEUX rbh
ThiJ/PfpI domain-containing protein rbh
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:AEA22658.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
Displaying items 1-30 of 72 in total

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