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scnpilot_cont_500_p_scaffold_1059_7

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 7250..8500

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Streptomyces sp. AA4 RepID=D9V3I6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 419.0
  • Bit_score: 542
  • Evalue 2.90e-151
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KIF75376.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 421.0
  • Bit_score: 544
  • Evalue 1.40e-151
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 411.0
  • Bit_score: 529
  • Evalue 1.20e-147

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Taxonomy

Streptomyces sp. 150FB → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
GTGCCGGCCCGGGATGCGGTGGAGGACGTCGTCCGTGCGGAGTGGGCCCGGGTGGTGGCCGGCGTCGCCCGGTTCACCGGTGACGTCGGGCTGGCCGAGGAGCTCGCGCAGGACGCCGTGGTGGCCGCGCTGGAGCAGTGGCCCGACTCGGGCGTCCCGCGCAACGCCGGCGCCTGGCTCACCACCGTCGCGAAGCGCCGGGCCGTTGATGTGTTCCGGCGCACCGAGAACGAGCAGCGCAAGTACGCGGAGCTCGGCCGGGACCTGGAGATCGACGGGGAAGGGGCGGACATGGAGCTCCCCGACCTCGACGATTCCGGGGACCACATCGACGACGATCTGCTCCGCCTCGTGTTCGTGTCCTGCCACCCGGCGCTGGCGGTCCCGTCCCGGGTCGCGCTGACCCTGCGCCTGCTCGGCGGCCTCACCACGGCCGAGATCGCGCGGGCCTACCTGACCTCCGAGCCGACGGTGGCCGCCCGCATCACCCGCGCCAAGAAGGCGCTGGCCGCCGCGGGCGTCCCGTTCGAGGTGCCGCCCGTGGCCGAGCGCGGGGAGCGCCTGGGGTCCGTCCTGGAGGTCATCTACCTGATCTTCAACGAGGGCTACTCGGCCACCACGGGCGACGACTGGCTGCGCCCCGGGCTGTGCGACGACGCCATCCGGCTCGGGCGGGTGCTGGCCGGTCTCACCCCGGACGAGCCGGAGGTGCACGGCCTGCTGGCGCTGATGGAGATCCAGGCGTCGCGGGCGGCCGCGCGCACCGGCCCGTCCGGGGAGCCGGTGCTGCTGCTCGACCAGGACCGCACCCTGTGGGACCGGCCGATGATCGACCGCGGCCTGACCGCGCTCGACCGCGCCGACCGGCTCGGCGGGGGCCCCTACACACTTCAGGCGGCGATCGCGGCCTGTCACGCCCGCGCCGCCCGTCCCGAGGACACCGCCTGGGACCGCATCGCCGCGATCTACGCGGTGCTGGCGGCGATGACGGGCTCCCCGGTGGTGGAGCTGAACCGGGCGGTGGCCGTGTCGATGGCCTCGGGGCCGCAGGCCGGCCTCGACCTGCTCGACACCCTCGCCGACGCCCCGGCCCTGCGCGGCTACCACCTGCTCTCCAGCGTGCGCGGCGACCTGCTCGCCAAGCTCGGGCGCGCCGACGAGGCCCGCGCCGAGTTCGAACGCGCCGCGGAGCTGACCCGCAACACCCGCGAGCGCGAGCTGTCCCTGGAGCGGGCCCGCAGCTTGGGCTGA
PROTEIN sequence
Length: 417
VPARDAVEDVVRAEWARVVAGVARFTGDVGLAEELAQDAVVAALEQWPDSGVPRNAGAWLTTVAKRRAVDVFRRTENEQRKYAELGRDLEIDGEGADMELPDLDDSGDHIDDDLLRLVFVSCHPALAVPSRVALTLRLLGGLTTAEIARAYLTSEPTVAARITRAKKALAAAGVPFEVPPVAERGERLGSVLEVIYLIFNEGYSATTGDDWLRPGLCDDAIRLGRVLAGLTPDEPEVHGLLALMEIQASRAAARTGPSGEPVLLLDQDRTLWDRPMIDRGLTALDRADRLGGGPYTLQAAIAACHARAARPEDTAWDRIAAIYAVLAAMTGSPVVELNRAVAVSMASGPQAGLDLLDTLADAPALRGYHLLSSVRGDLLAKLGRADEARAEFERAAELTRNTRERELSLERARSLG*