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scnpilot_cont_500_p_scaffold_1059

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1059_1
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..711
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI00034DC22C
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AJK58977.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lur
scnpilot_cont_500_p_scaffold_1059_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(731..1693)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRN3_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26241.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1059_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1982..4189)
DNA (2208bp) protein (736aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003741B72 rbh
molybdopterin oxidoreductase
Molybdopterin oxidoreductase {ECO:0000313|EMBL:ADB50986.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacte
scnpilot_cont_500_p_scaffold_1059_4
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4186..4767)
DNA (582bp) protein (194aa)
TetR family transcriptional regulator n=1 Tax=Nocardiopsis prasina RepID=UPI000345702A
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADH68332.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonv
scnpilot_cont_500_p_scaffold_1059_5
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4893..6641
DNA (1749bp) protein (583aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E8S9_9ACTN rbh
AMP-dependent synthetase {ECO:0000313|EMBL:KJK33701.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (No
AMP-dependent synthetase and ligase
scnpilot_cont_500_p_scaffold_1059_6
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

6741..7109
DNA (369bp) protein (123aa)
hypothetical protein AATC3_23463 n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628D55 id=1244714 bin=RBG9 species=Amycolatopsis sp. ATCC 39116 genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG9 organism_group=Chloroflexi
DGPFAETKE family protein Tax=RBG_16_Chloroflexi_57_11_curated
DGPFAETKE family protein
scnpilot_cont_500_p_scaffold_1059_7
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7250..8500
DNA (1251bp) protein (417aa)
RNA polymerase sigma factor n=1 Tax=Streptomyces sp. AA4 RepID=D9V3I6_9ACTO
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KIF75376.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
putative ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_cont_500_p_scaffold_1059_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8588..10270
DNA (1683bp) protein (561aa)
L-lactate transport n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT67_PSEUX rbh
L-lactate transport
L-lactate transport {ECO:0000313|EMBL:AEA26285.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1059_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10291..11280)
DNA (990bp) protein (330aa)
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase {ECO:0000313|EMBL:AEA28313.1}; EC=1.3.1.20 {ECO:0000313|EMBL:AEA28313.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonoca
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNL5_PSEUX rbh
scnpilot_cont_500_p_scaffold_1059_10
unknown

Not on your lists

comp(11308..11424)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1059_11
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11521..12516
DNA (996bp) protein (332aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEA70 rbh
NADPH:quinone reductase {ECO:0000313|EMBL:KJY26703.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
oxidoreductase C zinc-containing alcohol dehydrogenase
scnpilot_cont_500_p_scaffold_1059_12
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12456..15194)
DNA (2739bp) protein (913aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003825665 rbh
Vegetative cell wall protein gp1 {ECO:0000313|EMBL:EWM11578.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1059_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15279..15734
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037B8513
Transcriptional regulator YxaD {ECO:0000313|EMBL:EWM11579.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
MarR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1059_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15784..16581
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00036A1B97 rbh
Uncharacterized protein {ECO:0000313|EMBL:EXG82890.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1059_15
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16594..18327
DNA (1734bp) protein (578aa)
Carnitine O-acetyltransferase (EC:2.3.1.7)
Carnitine O-acetyltransferase {ECO:0000313|EMBL:ACY97498.1}; EC=2.3.1.7 {ECO:0000313|EMBL:ACY97498.1};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermo
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00035FD886 rbh
scnpilot_cont_500_p_scaffold_1059_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18320..19153
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU72_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24150.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1059_17
unknown

Not on your lists

comp(19128..19439)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1059_18
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19507..19806
DNA (300bp) protein (100aa)
Putative transcriptional regulator n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HUK2_9PSEU
PadR family transcriptional regulator {ECO:0000313|EMBL:KJS56397.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellom
putative 37.1 kDa protein found in transposons
scnpilot_cont_500_p_scaffold_1059_19
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19803..20510
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SET6_ACTS5
Uncharacterized protein {ECO:0000313|EMBL:KJS63082.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1059_20
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20644..20793
DNA (150bp) protein (50aa)
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Fra
Isoprenyl transferase n=1 Tax=Frankia sp. QA3 RepID=I9KDG0_9ACTO
scnpilot_cont_500_p_scaffold_1059_21
unknown

Not on your lists

comp(20727..20939)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1059_22
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20959..21390)
DNA (432bp) protein (144aa)
Transcriptional regulator, MarR family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5F1_9ACTO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EWM63328.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp
MarR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1059_23
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21452..23227
DNA (1776bp) protein (592aa)
ABC transporter ATP-binding protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LHL8_9ACTO rbh
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGL18837.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-
scnpilot_cont_500_p_scaffold_1059_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23244..23840)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y449_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39241.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
scnpilot_cont_500_p_scaffold_1059_25
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23851..24732)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WIQ1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD65215.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1059_26
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24784..27324)
DNA (2541bp) protein (847aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000380F655 rbh
SPG23_c22, whole genome shotgun sequence {ECO:0000313|EMBL:KIS26546.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;
scnpilot_cont_500_p_scaffold_1059_27
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27351..27689)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00036618CB
Uncharacterized protein {ECO:0000313|EMBL:EST27325.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
scnpilot_cont_500_p_scaffold_1059_28
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27972..28745
DNA (774bp) protein (258aa)
cyclase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AE25 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD56083.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
scnpilot_cont_500_p_scaffold_1059_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28807..30429
DNA (1623bp) protein (541aa)
acetolactate synthase (EC:2.2.1.6)
Acetolactate synthase {ECO:0000313|EMBL:AEA26644.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AEA26644.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003728FC6 rbh
scnpilot_cont_500_p_scaffold_1059_30
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30419..32017
DNA (1599bp) protein (533aa)
dehydrogenase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AE24 rbh
dehydrogenase rbh
Putative dehydrogenase {ECO:0000313|EMBL:BAD56084.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying items 1-30 of 58 in total

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