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scnpilot_cont_500_p_scaffold_1139_29

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(24331..26040)

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 521.0
  • Bit_score: 795
  • Evalue 7.20e-228
Probable choline dehydrogenase {ECO:0000313|EMBL:ABG93618.1}; EC=1.1.99.1 {ECO:0000313|EMBL:ABG93618.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.; similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 521.0
  • Bit_score: 795
  • Evalue 3.60e-227
choline oxidase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAA6 similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 515.0
  • Bit_score: 873
  • Evalue 1.30e-250
  • rbh

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Taxonomy

Rhodococcus jostii → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1710
GTGAGCGAGCTTGCGGGCTCCGCAGACGGCACCGTGAGCGAGCTTGCGAGCTCCGCAGACGGCACCGTGAGCGAGCTTGCGAGCTCCGCAGACGGCACCGTGAGCGAGCTTGCGAGCTCCGCAGACGGCACCGTGAGCGAGGTTGCGAGCTCCGCAGACAGCATGAGCGACACGTTCGACTACGTCGTCGTCGGCGGCGGGTCGTCGGGCTGTGCGCTCGCCGCCCGGCTGTCCGAGGACCCCGCCGTCACCGTCTGCCTGCTGGAGGCCGGGCCGTCCGATGTGGACGATCCGGCGATCCTGCGGCTCGAGGACTGGATGGGGCTGCTCGACTCCGGCTACGACTGGGACTACCTCGTCGAGCCACAGCAGCACGGCAACTCCTTCCTGCGCCATGCGCGCGCGAAGGTGCTCGGCGGCTGCTCGTCGCACAACTCGTGCATCGCCTTCTGGACGCCGCGCGAGGACCTCGACGAGTGGGCCGCAGGAGGCTGCACCGGCTGGAGCGCCGACGAGTGCTGGCCGCTGATCAAGCGGCTGGAGACCAACGACGGGGAGTGGGACGGCCACGGCCGCTCCGGCCCGGTCAACCTGCGCCAGATCCCGCCGGACGACCCGTGCGGGGTGGCGGTGCTCGAGGCGGCCGCGGCGGTGGGGCTGCCCACCGTCCGGTTCAACGAGGGCCACACCGTCACCGAGGGCGCCGGGTTCTTCCAGATCAACGCCGCGGCCGACAACACCCGCATGTCGTCGTCGCACGCGTACCTGCACCCGATCATGGGCACGCGGCCCAACCTGGAGGTCCGGACGGGCGCGTGGGCGTCGAAGGTCCTGTTCGTGGGGAGGAAGGCCACCGGCGTCGAGTACCAGCAGGACATCGGCCCCGGCCGCCAGGTGGTGAACGCCCGCCGCGAGGTGATCCTCTCCACCGGCGCGATCGACACCCCGAAGCTGCTGATGCTGTCGGGGATCGGCCCGTCCGCGCACCTGCGCGAGATGGGCCTCGACGTGCTGGTGGACTCGCCCGGCGTCGGCGCCAACCTCGACGACCACGTCGAGGGCCTCGTGATGTGGGAGGCCGCCAAGCCGATGGTCACGACCTCCACGCAGTGGTGGGAGATCGGGCTGTTCGCGCGCACCGAGGAGGGGCTGGACCGGCCGGACCTGATGATGCACTACGGCTCGGTGCCGTTCGACCTCAACACGGTGCGCTGGGGCTACCCGACCACCGACAACGGCTTCTGCCTCACGCCCAACGTCACACGCGGACGGTCGCGGGGCACGGTGCGGCTGCGCTCGCTGGACTTCCGCGACCGGGCGAAGGTCGACCCGCGGTACTTCACCGACCCCGAGGGCCACGACATGGCCGTCATGCTGCACGGCGTGAAGCTCGCGCGGCGGATCGCGGAGCAGCCCGCGCTCAAGGAGTGGATCACCCGGGAGCTGACGCCGGGCCCGGACGCGGTGACCGACGACGACCTCGTCGACTACATCACCAAGACCCACAACACCGTCTACCACCCGGCGTGCACGGCGAAGATGGGACCGGGCTCCGACCCGATGGCCGTCGTGGACCCCCAGCTGCGCGTGCGCGGGGTGGAGGGGCTGCGGATCGCCGACGCGTCGATCCTGCCGTTCCTGCCGGCGATCAACCCCAACATCACCTGCATGATGATCGGGGAGAAGGCCTCGGACCTCATTCGCGGCTGA
PROTEIN sequence
Length: 570
VSELAGSADGTVSELASSADGTVSELASSADGTVSELASSADGTVSEVASSADSMSDTFDYVVVGGGSSGCALAARLSEDPAVTVCLLEAGPSDVDDPAILRLEDWMGLLDSGYDWDYLVEPQQHGNSFLRHARAKVLGGCSSHNSCIAFWTPREDLDEWAAGGCTGWSADECWPLIKRLETNDGEWDGHGRSGPVNLRQIPPDDPCGVAVLEAAAAVGLPTVRFNEGHTVTEGAGFFQINAAADNTRMSSSHAYLHPIMGTRPNLEVRTGAWASKVLFVGRKATGVEYQQDIGPGRQVVNARREVILSTGAIDTPKLLMLSGIGPSAHLREMGLDVLVDSPGVGANLDDHVEGLVMWEAAKPMVTTSTQWWEIGLFARTEEGLDRPDLMMHYGSVPFDLNTVRWGYPTTDNGFCLTPNVTRGRSRGTVRLRSLDFRDRAKVDPRYFTDPEGHDMAVMLHGVKLARRIAEQPALKEWITRELTPGPDAVTDDDLVDYITKTHNTVYHPACTAKMGPGSDPMAVVDPQLRVRGVEGLRIADASILPFLPAINPNITCMMIGEKASDLIRG*