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scnpilot_cont_500_p_scaffold_1139

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1139_1
unknown

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1139_2
unknown

Not on your lists

comp(122..553)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1139_3
unknown

Not on your lists

comp(706..1005)
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1139_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1031..2140)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEB75 rbh
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEA26558.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1139_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2239..3168
DNA (930bp) protein (310aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:AEA26559.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEA26559.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="P
Glucokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI5_PSEUX rbh
scnpilot_cont_500_p_scaffold_1139_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3418..5088
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI6_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26560.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1139_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5085..5591
DNA (507bp) protein (169aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYJ1_PSEUX
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA26561.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
scnpilot_cont_500_p_scaffold_1139_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5809..6066
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000369BC76
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26563.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_1139_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6060..6779)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000370CE11 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP81690.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_1139_10
unknown

Not on your lists

7155..7463
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1139_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7561..10758
DNA (3198bp) protein (1066aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEA26566.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEA26566.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYJ6_PSEUX rbh
scnpilot_cont_500_p_scaffold_1139_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10809..11708)
DNA (900bp) protein (300aa)
Peptidase S15 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXN4_PSEUX rbh
peptidase S15
Peptidase S15 {ECO:0000313|EMBL:AEA27617.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_1139_13
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11788..12639)
DNA (852bp) protein (284aa)
lipase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037E558F rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFL10992.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
lipase class 2
scnpilot_cont_500_p_scaffold_1139_14
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12732..13361
DNA (630bp) protein (210aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V004_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL10991.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1139_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13371..14669
DNA (1299bp) protein (433aa)
NADH dehydrogenase n=1 Tax=Rhodococcus opacus RepID=UPI00029CAF41 rbh
NADH dehydrogenase {ECO:0000313|EMBL:AII05493.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
putative NADH dehydrogenase
scnpilot_cont_500_p_scaffold_1139_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14660..15883)
DNA (1224bp) protein (408aa)
MFS transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEB6C rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26569.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_1139_17
unknown

Not on your lists

15943..16197
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1139_18
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16172..16852)
DNA (681bp) protein (227aa)
Acetyltransferase n=4 Tax=Amycolatopsis mediterranei RepID=I7DVK7_AMYMS
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AEK41577.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699
scnpilot_cont_500_p_scaffold_1139_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16902..17651
DNA (750bp) protein (250aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYK0_PSEUX rbh
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA26570.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
scnpilot_cont_500_p_scaffold_1139_20
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17783..18379
DNA (597bp) protein (199aa)
membrane protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036C28F0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEL19349.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
scnpilot_cont_500_p_scaffold_1139_21
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18402..19058)
DNA (657bp) protein (219aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000375B891
putative acyl carrier protein phosphodiesterase
scnpilot_cont_500_p_scaffold_1139_22
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19162..19659
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000361C207
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EWC63719.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospor
MarR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1139_23
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19684..21516)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI0003621F3A rbh
Mycobacterium llatzerense strain CLUC14 Mllat_contig000030, whole genome shotgun sequence {ECO:0000313|EMBL:KIU15265.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteria
putative signal-transduction protein containing cAMP-binding and CBS domains
scnpilot_cont_500_p_scaffold_1139_24
unknown

Not on your lists

21557..21748
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1139_25
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22101..22223
DNA (123bp) protein (41aa)
Putative lipoprotein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EUE8_MODMB
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CCH87011.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC5
scnpilot_cont_500_p_scaffold_1139_26
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22220..22459
DNA (240bp) protein (80aa)
hypothetical protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF280
Uncharacterized protein {ECO:0000313|EMBL:ERI40742.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
lipoprotein
scnpilot_cont_500_p_scaffold_1139_27
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(22463..22852)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Mycobacterium sp. 012931 RepID=S7PHT6_9MYCO
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
scnpilot_cont_500_p_scaffold_1139_28
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23322..24344
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K5H8_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH32857.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
scnpilot_cont_500_p_scaffold_1139_29
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24331..26040)
DNA (1710bp) protein (570aa)
choline dehydrogenase (EC:1.1.99.1)
Probable choline dehydrogenase {ECO:0000313|EMBL:ABG93618.1}; EC=1.1.99.1 {ECO:0000313|EMBL:ABG93618.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;
choline oxidase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAA6 rbh
scnpilot_cont_500_p_scaffold_1139_30
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26037..27554)
DNA (1518bp) protein (506aa)
amino acid permease n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268B3 rbh
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AIJ24590.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
Displaying items 1-30 of 33 in total

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