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scnpilot_cont_500_p_scaffold_1785_41

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 36265..36837

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZE1_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 89.0
  • Bit_score: 86
  • Evalue 4.40e-14
transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 89.0
  • Bit_score: 86
  • Evalue 1.20e-14
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 89.0
  • Bit_score: 86
  • Evalue 6.10e-14

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAGCGCGCCGACGACCCGCCGCACCTCCCGCGAGGCGGTGGAAACCCACACCCGGCCCGACGACTTCCGGCATCGGGCGGCGTGCCGCTCGGTGGACCCGGAGATCTTCTTCCCGACCGCGGTCGAGGGCCCGGAGTACGAGACGCAGGTGCGGATCGCGAAGGCGGTGTGCGGCGGGTGCCCGGTGCTGGACGAGTGCCGGACGTGGGCGGTGGCGCACCAGCCCGACGGGATCGCCGGTGGCATGACCGAGCACGAGCGCCGCACGGCGCGGACCCGGCGTCGCGGCGCCGGCCACCGCACGCAGGTCGCGGCGCGGCCATCGGGTGGGACCCGTCGGGAGGTCGCGGCGGCGGGTCGGGCCGCGATCGCCGAGGGCCTCTCACCGCGGGAGGCGGCGGACGCGTTCGGGGTCAGCCCCCGCACGGCGGACCGCTGGGCCCAGGCCGTGCACACCGGCACCCGCAGCACGGGCGGGGGGAAGGACGCGCCGGCTGCAACCAGCGCGCCCTTCCGGATCTCCCACGCAAACCCCCAGGCAGGGACACGAGCGGAAGGACACCGAGGGTAG
PROTEIN sequence
Length: 191
MSAPTTRRTSREAVETHTRPDDFRHRAACRSVDPEIFFPTAVEGPEYETQVRIAKAVCGGCPVLDECRTWAVAHQPDGIAGGMTEHERRTARTRRRGAGHRTQVAARPSGGTRREVAAAGRAAIAEGLSPREAADAFGVSPRTADRWAQAVHTGTRSTGGGKDAPAATSAPFRISHANPQAGTRAEGHRG*