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scnpilot_cont_500_p_scaffold_1785_44

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 38216..40024

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXG8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 602.0
  • Bit_score: 596
  • Evalue 3.20e-167
type IV secretory pathway VirD4 protein-like protein similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 602.0
  • Bit_score: 596
  • Evalue 8.90e-168
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:AEA26542.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 602.0
  • Bit_score: 596
  • Evalue 4.40e-167

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGAACACCTCGGTGGTGGTGGTTCTGGCGGTGCTGGTCGCGGTCGCGCTGATCGCGCGGCGCCGTGGGGCGTGGGCGGTCGCGGCCGGCTCTGGGGTGGCGGCGGTGTTGCCAGCGTGGACGCTGGTCCGCACGAGCAACCCGTTCCTGCTCGGCCTGCTGGTGGCCGCGCTGGTCGTTGTGGCGTGGCTGAGGTGGGGCCGGACGATGGCGACGGTCACCCGCTGGGGCGCGTCTGCGCGGCGAAAGGCCGGGGTGGCGTCGATCACCGACATCGCCCGTACCCGTTCGGCGGTGGCGATGCGCCGTCACGTGGGAGTGCTGCGCCCGTCGTTGCAGGCCCGGTCACGGTTGGCGCAGGTGAGGCAGTTGGGCCGGTTCCCGGTGGCCGAGGTCGCGGTGCAGCTATGCCGGACCGGGGGACTGCGGGTTTGGTCGACCGTGCGGGACGTGGTCGTGGTGTTCGGCGGGCCGGGTGCTGGGAAGACGCAGTGGCTGGCCGGACGGATCATCGACGCGCCCGGCGCGGTGCTGGCCACCTCCACACGCACCGATTTGCTCGACCAGACCGGCCCACTACGCGAGCGGGTGGGCCCGGTGTTCGTGTTCAACCCGGTCGGGCTCGGTGACCGCCCCTCGACGATCACGTTCGACCCGCTGACCGGCTGCTGTGATCCGGTCGCGGCGCATGAGCGGGCCGCGGACATGCTCGCCGCGATCAGCCACGGCGGTCTCGGGGACCGGGAGTTCTGGGAGGGCCAAGGTCGGCGGAACCTGGCCGCGCTGCTGCACGCCGCCGCGCTGGGCGGGCTGACTATGAACGCGGTGTCGGACTGGCTGTCGAACCTGGACGCCTCCGAGGCCGAGATCCTCACTCTGCTGCGCGCGAAGAGCCCCGAGCCGTCGTTCATCGCGTCGGTGACGCAGTTCATCGGGACGAACGGCAACACCCGGACCTCGATCGAGTCGACGATCATGCCCGCGCTCGGGTGGCTCACCCACGGCCCCGCGCGCGCAGCCGCTCTGCCGTTGTCCGAGGGCGGGCACCCACTGGACGTGGCCGTCCTGCTGGAACAGCGGGCGACCGTGTTCATGCTCGGCGGGGAGGAGGCGCAGGTCGCGCCGCTGGTGTGCGCCCTGACTGGCTACATCGCGCGCGAGGCGCGCCGTCTGGCAGCGCTGCGGCCGGGTGGGCGGTTGGACCCGCCGCTGTCGTTGCGTCTGGACGAGGCCGCGCTGATCTGCCCGGTCCCGCTGGATCGTTGGACCGCGGACATGGGCGGGCGCGGCGTGAACATCGTGGCGATGTTCCAGTCCCGAGCCCAGCTCGTGGACCGCTATGGGCAGGCAAAGGCCGCGGTGATCCTCAACAACTCCGGTGCTCGGGTGCTGTTCGGCGGCACCGCCGACCGTGACGATCTCGGGTATTGGTCGACCCTGGCGGGGGAACGCGACGAGCCGATCACCACCACGGACATGCACGGCCGGGTCGCCTCCCGCAGCGTGCGGAGGGTGCCGGTGCTCGCGCCGGCGCAGTTGGCGAACCTGCCGGCTGGGCGGGTGGTGGTATTCACCCGAGACATGCCGCCGGTCGTCGGCCGTGCCGAGCAGGCGTGGCGTCGCCGGGACGTGCACGCCGTGCACCACCCCGAAGCGCTCACCGTCCGCGCCCGCGACTGGCGGGCCCGCCCCATGCCGCTGCGTGGATTGGGCGTCGGACCCGACCGGCCCGGGCGTGGACCGGGGCGCGGAGCAGGGCGGCGGCGGGTTGGTGCGGCGCCCGGTTCACCGCGGTGCGGGTGTACGTGA
PROTEIN sequence
Length: 603
MNTSVVVVLAVLVAVALIARRRGAWAVAAGSGVAAVLPAWTLVRTSNPFLLGLLVAALVVVAWLRWGRTMATVTRWGASARRKAGVASITDIARTRSAVAMRRHVGVLRPSLQARSRLAQVRQLGRFPVAEVAVQLCRTGGLRVWSTVRDVVVVFGGPGAGKTQWLAGRIIDAPGAVLATSTRTDLLDQTGPLRERVGPVFVFNPVGLGDRPSTITFDPLTGCCDPVAAHERAADMLAAISHGGLGDREFWEGQGRRNLAALLHAAALGGLTMNAVSDWLSNLDASEAEILTLLRAKSPEPSFIASVTQFIGTNGNTRTSIESTIMPALGWLTHGPARAAALPLSEGGHPLDVAVLLEQRATVFMLGGEEAQVAPLVCALTGYIAREARRLAALRPGGRLDPPLSLRLDEAALICPVPLDRWTADMGGRGVNIVAMFQSRAQLVDRYGQAKAAVILNNSGARVLFGGTADRDDLGYWSTLAGERDEPITTTDMHGRVASRSVRRVPVLAPAQLANLPAGRVVVFTRDMPPVVGRAEQAWRRRDVHAVHHPEALTVRARDWRARPMPLRGLGVGPDRPGRGPGRGAGRRRVGAAPGSPRCGCT*