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scnpilot_cont_500_p_scaffold_2133_3

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(1960..2391)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Nocardiopsis halotolerans RepID=UPI00037F35F0 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 121.0
  • Bit_score: 182
  • Evalue 3.40e-43
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EJJ01518.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 121.0
  • Bit_score: 181
  • Evalue 1.10e-42
DNA binding protein similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 121.0
  • Bit_score: 180
  • Evalue 4.70e-43

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Taxonomy

Rhodococcus sp. JVH1 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 432
GTGCGGCCGGGAAGCGGCCCGCCGACACCACCCGGTTCCTTCTACCTCGACCCGTCCGGGCGGGAGTTCTTCGTCGACTTCGACCGCATGGCGATGGACGCGGCGGCGATGCTCCGGCTCGAGGCGGGGCGCAACCCCCACGACCGGGACCTCATCATCCTGGTCGGCGAGCTCTCCACCCAGTCGGAGCTGTTCCGCCGGCACTGGGCCTCCCAGAACATCCGGTTCCACCGCAGTGGACGCAAACGGCTGCGGCATCCGGCCGTCGGTGAGCTCGACCTCGACGTCGAGGCGACGCAGCTGCCGGCCGACCCGGAACTGCAGCTCGACATCTACACCGCCGCCCGCGGCACGCAGGCCGCCGACGGCCTCGAGCTCTTCGCCACGTGGGCCGCAGCCCGTATCGCGGAGGCGGCGGACACGGGCTCCTGA
PROTEIN sequence
Length: 144
VRPGSGPPTPPGSFYLDPSGREFFVDFDRMAMDAAAMLRLEAGRNPHDRDLIILVGELSTQSELFRRHWASQNIRFHRSGRKRLRHPAVGELDLDVEATQLPADPELQLDIYTAARGTQAADGLELFATWAAARIAEAADTGS*