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scnpilot_cont_500_p_scaffold_2133

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_2133_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1077
DNA (1077bp) protein (359aa)
Ribosome-binding ATPase YchF n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ03_PSEUX rbh
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
scnpilot_cont_500_p_scaffold_2133_2
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1078..1884)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5VDX4_STRCU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS73369.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
scnpilot_cont_500_p_scaffold_2133_3
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1960..2391)
DNA (432bp) protein (144aa)
XRE family transcriptional regulator n=1 Tax=Nocardiopsis halotolerans RepID=UPI00037F35F0
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EJJ01518.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
DNA binding protein
scnpilot_cont_500_p_scaffold_2133_4
unknown

Not on your lists

2908..3015
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2133_5
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3228..4019
DNA (792bp) protein (264aa)
Aminoglycoside phosphotransferase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W6I7_KINRD
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS02426.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (stra
scnpilot_cont_500_p_scaffold_2133_6
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3988..4866)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Streptomyces lividans RepID=S1SQB3_STRLI rbh
SCF51A.07c; oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AIJ18035.1}; TaxID=457428 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
scnpilot_cont_500_p_scaffold_2133_7
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4947..5522
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000366A936
TetR family transcriptional regulator {ECO:0000313|EMBL:EHN77957.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicof
tetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_2133_8
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5740..5943)
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237ADFC
Cold shock protein CspA {ECO:0000313|EMBL:CEL21871.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
cold-shock DNA-binding domain-containing protein
scnpilot_cont_500_p_scaffold_2133_9
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6125..7183)
DNA (1059bp) protein (353aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MZA7_SACVD rbh
scnpilot_cont_500_p_scaffold_2133_10
unknown

Not on your lists

7461..7670
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_2133_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7642..7935)
DNA (294bp) protein (98aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocard
Transcriptional coactivator/pterin dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKN3_PSEUX
transcriptional coactivator/pterin dehydratase
scnpilot_cont_500_p_scaffold_2133_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8053..8883)
DNA (831bp) protein (277aa)
Putative ABC transporter integral membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKN4_PSEUX rbh
ABC transporter integral membrane protein
Putative ABC transporter integral membrane protein {ECO:0000313|EMBL:AEA23241.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseud
scnpilot_cont_500_p_scaffold_2133_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8880..9833)
DNA (954bp) protein (318aa)
ABC transporter related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKN5_PSEUX rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEA23242.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
scnpilot_cont_500_p_scaffold_2133_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9833..10849)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKN6_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23243.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_2133_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10944..11624
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKN8_PSEUX rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA23245.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Ps
scnpilot_cont_500_p_scaffold_2133_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11621..12940
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKN9_PSEUX rbh
histidine kinase
scnpilot_cont_500_p_scaffold_2133_17
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12998..13918)
DNA (921bp) protein (307aa)
Pentapeptide repeat-containing protein n=1 Tax=Streptomyces collinus Tu 365 RepID=S5VZ36_STRCU rbh
pentapeptide repeat-containing protein
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:AGS73265.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinu
scnpilot_cont_500_p_scaffold_2133_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13937..14785
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE555
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEA23247.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
scnpilot_cont_500_p_scaffold_2133_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15065..15958
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ50_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27246.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_2133_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16636..18561
DNA (1926bp) protein (642aa)
GTP-binding protein TypA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKP3_PSEUX rbh
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:AEA23250.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_2133_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18577..20280
DNA (1704bp) protein (568aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE18C rbh
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA23251.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
scnpilot_cont_500_p_scaffold_2133_22
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20513..22333
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003651791 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWT07934.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5
calT6; protein CalT6
scnpilot_cont_500_p_scaffold_2133_23
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22343..23332
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036B9114 rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EWT07933.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatiredu
putative peptide ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_2133_24
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23329..24435
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036DCE04 rbh
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWT07932.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium
putative peptide ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_2133_25
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24432..25430
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003629980 rbh
ABC transporter permease {ECO:0000313|EMBL:EWT07931.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q
appC; oligopeptide transport system permease AppC
scnpilot_cont_500_p_scaffold_2133_26
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25427..26386
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000375E105 rbh
ABC transporter permease {ECO:0000313|EMBL:EWT07930.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q
peptide transport system permease protein
scnpilot_cont_500_p_scaffold_2133_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26445..27332
DNA (888bp) protein (296aa)
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase {ECO:0000256|HAMAP-Rule:MF_01696}; Short=GlcNAc-Ins deacetylase {ECO:0000256|HAMAP-Rule:MF_01696};; EC=3.5.1.103 {ECO:0000256|HA
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKP9_PSEUX rbh
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase
scnpilot_cont_500_p_scaffold_2133_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27329..27724
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKQ0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23257.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_2133_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27717..28463
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE184 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA23258.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
hypothetical protein
scnpilot_cont_500_p_scaffold_2133_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28442..29401)
DNA (960bp) protein (320aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMB9_PSEUX rbh
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA23259.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
Displaying items 1-30 of 31 in total

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