ggKbase home page

scnpilot_cont_500_p_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 244 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_42_1
unknown

Not on your lists

614..1111
DNA (498bp) protein (166aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_42_2
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1200..1385
DNA (186bp) protein (62aa)
PEBP family protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZ18_ACIFD
PEBP family protein
PEBP family protein {ECO:0000313|EMBL:ACU53976.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferroox
scnpilot_cont_500_p_scaffold_42_3
unknown

Not on your lists

comp(1496..2047)
DNA (552bp) protein (184aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_42_4
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2180..3160)
DNA (981bp) protein (327aa)
alpha integrin n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00035F715D
Uncharacterized protein {ECO:0000313|EMBL:KGM14816.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM
FG-GAP repeat-containing protein
scnpilot_cont_500_p_scaffold_42_5
unknown

Not on your lists

comp(3177..3905)
DNA (729bp) protein (243aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_42_6
unknown

Not on your lists

4081..4278
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_42_7
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4341..5609
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UI07_CELFN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG73431.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482
scnpilot_cont_500_p_scaffold_42_8
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5876..6274)
DNA (399bp) protein (133aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E5Z8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH76603.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_cont_500_p_scaffold_42_9
unknown

Not on your lists

comp(6410..6631)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_42_10
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6770..7147
DNA (378bp) protein (126aa)
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FTX9_ISOV2
scnpilot_cont_500_p_scaffold_42_11
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7176..9167)
DNA (1992bp) protein (664aa)
Glycogen debranching enzyme n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BAP5_SANKS
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:KHL01058.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
glycogen debranching enzyme
scnpilot_cont_500_p_scaffold_42_12
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9321..10448
DNA (1128bp) protein (376aa)
Transcriptional regulator n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BAP4_SANKS rbh
Uncharacterized protein {ECO:0000313|EMBL:KHL04245.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
transcriptional regulator
scnpilot_cont_500_p_scaffold_42_13
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10485..11747
DNA (1263bp) protein (421aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B7A404
maltose-binding periplasmic protein
Maltose-binding periplasmic protein {ECO:0000313|EMBL:ACZ20594.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (stra
scnpilot_cont_500_p_scaffold_42_14
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11759..12844
DNA (1086bp) protein (362aa)
Carbohydrate ABC transporter membrane protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BAP2_SANKS
carbohydrate ABC transporter membrane protein
Carbohydrate ABC transporter membrane protein {ECO:0000313|EMBL:ACZ20593.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter kedd
scnpilot_cont_500_p_scaffold_42_15
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12837..13724
DNA (888bp) protein (296aa)
Carbohydrate ABC transporter membrane protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BAP1_SANKS
carbohydrate ABC transporter membrane protein
Carbohydrate ABC transporter membrane protein {ECO:0000313|EMBL:ACZ20592.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter kedd
scnpilot_cont_500_p_scaffold_42_16
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13999..14436)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B6BAC9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU48658.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC
scnpilot_cont_500_p_scaffold_42_17
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14497..15792)
DNA (1296bp) protein (432aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Ce
Glycoside hydrolase family 10 n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H8I0_CELFA
glycoside hydrolase family 10
scnpilot_cont_500_p_scaffold_42_18
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15789..16841)
DNA (1053bp) protein (351aa)
Transcriptional regulator, LacI family n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y3S8_THEBD
LacI family transcriptional regulator
Tax=BJP_IG2157_Actinomycetales_63_19
scnpilot_cont_500_p_scaffold_42_19
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17023..18414
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036441AF rbh
extracellular solute-binding protein
Tax=BJP_IG2157_Clostridiales_52_13
scnpilot_cont_500_p_scaffold_42_20
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18401..19408
DNA (1008bp) protein (336aa)
ABC transporter permease n=1 Tax=Humibacter albus RepID=UPI0003B5A1D8 rbh
ABC transporter permease {ECO:0000313|EMBL:KHL02460.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
binding-protein-dependent transport system inner membrane protein
scnpilot_cont_500_p_scaffold_42_21
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19410..20198
DNA (789bp) protein (263aa)
ABC-type sugar transport system, permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FTL2_9CLOT
binding-protein-dependent transport system inner membrane protein
Tax=BJP_IG2157_Clostridiales_52_13
scnpilot_cont_500_p_scaffold_42_22
Streptomyces rochei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20195..20941
DNA (747bp) protein (249aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289A60D
Probable glucose dehydrogenase {ECO:0000313|EMBL:BAC76572.1}; TaxID=1928 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rochei (Streptomyc
dehydrogenase
scnpilot_cont_500_p_scaffold_42_23
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21008..22081
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036FF939 rbh
Oxidoreductase {ECO:0000313|EMBL:EZP27505.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
oxidoreductase domain-containing protein rbh
scnpilot_cont_500_p_scaffold_42_24
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22081..22455
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037FCD68
Uncharacterized protein {ECO:0000313|EMBL:KHL02458.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
4-oxalocrotonate tautomerase
scnpilot_cont_500_p_scaffold_42_25
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22452..24821
DNA (2370bp) protein (790aa)
Glycoside hydrolase family 3 domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6T9_CELFA
Beta-glucosidase {ECO:0000313|EMBL:KGM14403.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
glycoside hydrolase family 3 domain-containing protein
scnpilot_cont_500_p_scaffold_42_26
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24818..25561
DNA (744bp) protein (248aa)
oxidoreductase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003686314
dehydrogenase
Probable dehydrogenase protein {ECO:0000313|EMBL:ABC89608.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
scnpilot_cont_500_p_scaffold_42_27
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25627..26145
DNA (519bp) protein (173aa)
Transcriptional regulator, LacI family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PW31_CATAD
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACU73279.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidip
scnpilot_cont_500_p_scaffold_42_28
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26167..27690)
DNA (1524bp) protein (508aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WPB5_ACTMD rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACU38617.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;"
scnpilot_cont_500_p_scaffold_42_29
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27844..28557
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000367F76B
Uncharacterized protein {ECO:0000313|EMBL:KGM00804.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
PadR family transcriptional regulator
scnpilot_cont_500_p_scaffold_42_30
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28787..29794
DNA (1008bp) protein (336aa)
ABC transporter ATP-binding protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B3685E
daunorubicin resistance ABC transporter ATPase subunit rbh
Daunorubicin resistance ABC transporter ATPase subunit {ECO:0000313|EMBL:ACQ81790.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenber
Displaying items 1-30 of 244 in total

View Taxonomy