ggKbase home page

scnpilot_cont_500_p_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_83_1
GWA2_OD1_47_10, Parcubacteria, Bacteria

Not on your lists

2..841
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Clostridium acetobutylicum DSM 1731 RepID=F7ZP85_CLOAT
hypothetical protein
YD repeat-containing protein Tax=GWA2_OD1_47_10
scnpilot_cont_500_p_scaffold_83_2
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1304..1582
DNA (279bp) protein (93aa)
Putative large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22984.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_cont_500_p_scaffold_83_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1596..2186
DNA (591bp) protein (197aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=H5B7C0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EHP66676.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
scnpilot_cont_500_p_scaffold_83_4
unknown

Not on your lists

comp(2852..3721)
DNA (870bp) protein (290aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_83_5
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3918..5882)
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=2 Tax=Clostridium acetobutylicum RepID=F0KC97_CLOAE
hypothetical protein
Uncharacterized conserved membrane protein, YUEB B.subtilis homolog {ECO:0000313|EMBL:AAK81617.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
scnpilot_cont_500_p_scaffold_83_6
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6165..6797
DNA (633bp) protein (211aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacteriaceae RepID=UPI000366C2DC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW42233.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 4630
scnpilot_cont_500_p_scaffold_83_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7003..7563
DNA (561bp) protein (187aa)
RNA polymerase sigma factor SigK n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9P8_LEIAQ rbh
RNA polymerase sigma factor SigK {ECO:0000313|EMBL:ERK71417.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
RNA polymerase sigma factor SigK
scnpilot_cont_500_p_scaffold_83_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7560..8348
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRG7_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71416.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_83_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8445..9224)
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R849_LEIAQ rbh
phosphate transporter ATP-binding protein rbh
scnpilot_cont_500_p_scaffold_83_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9271..10374)
DNA (1104bp) protein (368aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RS84_LEIAQ rbh
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ERK71414.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquati
ABC transporter permease rbh
scnpilot_cont_500_p_scaffold_83_11
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10374..11321)
DNA (948bp) protein (316aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T1Q8_LEIAQ rbh
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:ERK71413.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquati
ABC transporter permease rbh
scnpilot_cont_500_p_scaffold_83_12
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11420..12514)
DNA (1095bp) protein (365aa)
Phosphate-binding protein PstS n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T9P4_LEIAQ rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
pstS; phosphate porter rbh
scnpilot_cont_500_p_scaffold_83_13
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12662..15583)
DNA (2922bp) protein (974aa)
helicase n=1 Tax=Glaciibacter superstes RepID=UPI0003B38F94 rbh
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03208.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
SNF2-related protein rbh
scnpilot_cont_500_p_scaffold_83_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15669..16607)
DNA (939bp) protein (313aa)
Hydrolase, NUDIX family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRJ3_LEIAQ rbh
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERK71184.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
scnpilot_cont_500_p_scaffold_83_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16604..18802)
DNA (2199bp) protein (733aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase (EC:2.7.4.1) rbh
Polyphosphate kinase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R7G0_LEIAQ rbh
scnpilot_cont_500_p_scaffold_83_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18895..19587)
DNA (693bp) protein (231aa)
Transcriptional regulatory protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQS4_LEIAQ rbh
Transcriptional regulatory protein {ECO:0000313|EMBL:ERK71186.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.
GlnR family transcriptional regulator rbh
scnpilot_cont_500_p_scaffold_83_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19678..20046
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T907_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71187.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
BigG family transcription antiterminator
scnpilot_cont_500_p_scaffold_83_18
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20061..20171
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6ADG9_LEIXX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT89577.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07)
scnpilot_cont_500_p_scaffold_83_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20189..20785
DNA (597bp) protein (199aa)
UPF0678 fatty acid-binding protein-like protein N136_02466 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T116_LEIAQ rbh
UPF0678 fatty acid-binding protein-like protein N136_02466 {ECO:0000256|HAMAP-Rule:MF_01297}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Le
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_83_20
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20785..21918
DNA (1134bp) protein (378aa)
Glycine cleavage T-protein barrel domain protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRJ7_LEIAQ rbh
Glycine cleavage T-protein barrel domain protein {ECO:0000313|EMBL:ERK71189.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquati
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_83_21
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22052..22870)
DNA (819bp) protein (273aa)
methylase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003698DC9 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAT89574.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07)
scnpilot_cont_500_p_scaffold_83_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22911..23660
DNA (750bp) protein (250aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6M1_LEIAQ rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};;
phosphoglyceromutase rbh
scnpilot_cont_500_p_scaffold_83_23
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23749..24405)
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SYP3_LEIAQ rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leif
phoU; phosphate transport system regulator rbh
scnpilot_cont_500_p_scaffold_83_24
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24599..25750
DNA (1152bp) protein (384aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="
Putative signal-transduction histidine kinase senX3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RP62_LEIAQ rbh
two-component system sensor protein rbh
scnpilot_cont_500_p_scaffold_83_25
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25747..26430
DNA (684bp) protein (228aa)
Sensory transduction protein RegX3 n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R528_LEIAQ rbh
Sensory transduction protein RegX3 {ECO:0000313|EMBL:ERK70365.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.
two-component system regulatory protein rbh
scnpilot_cont_500_p_scaffold_83_26
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26506..27066)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RNE9_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK70366.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_83_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27246..27728
DNA (483bp) protein (161aa)
CarD-like protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6M6_LEIAQ rbh
CarD-like protein {ECO:0000313|EMBL:ERK70367.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
transcriptional regulator, CarD-like regulator rbh
scnpilot_cont_500_p_scaffold_83_28
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27879..28517
DNA (639bp) protein (213aa)
NAD-dependent epimerase n=1 Tax=Micrococcus luteus RepID=UPI0002DA0CFC
Uncharacterized protein {ECO:0000313|EMBL:EFD50607.1}; TaxID=596312 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus SK58.;"
NADH-flavin reductase
scnpilot_cont_500_p_scaffold_83_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28585..29727
DNA (1143bp) protein (381aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RCQ1_LEIAQ rbh
Bifunctional enzyme IspD/IspF {ECO:0000256|SAAS:SAAS00096235}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase rbh
scnpilot_cont_500_p_scaffold_83_30
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29762..31195
DNA (1434bp) protein (478aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2QTR9_LEIAQ rbh
cysteinyl-tRNA synthetase rbh
Displaying items 1-30 of 237 in total

View Taxonomy