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scnpilot_cont_500_p_scaffold_1027

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1027_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(253..2517)
DNA (2265bp) protein (755aa)
Penicillin-binding protein, 1A family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCM2_MESCW rbh
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ADV10864.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
penicillin-binding protein rbh
scnpilot_cont_500_p_scaffold_1027_2

Not on your lists

comp(2697..3365)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Vibrio cyclitrophicus RepID=UPI000300A281
Uncharacterized protein {ECO:0000313|EMBL:KKN92889.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_cont_500_p_scaffold_1027_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3805..4188)
DNA (384bp) protein (128aa)
Mll3289 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GK1_RHILO
hypothetical protein
Mll3289 protein {ECO:0000313|EMBL:BAB50215.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
scnpilot_cont_500_p_scaffold_1027_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4439..4585)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4X8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13213.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
scnpilot_cont_500_p_scaffold_1027_5
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4695..4949)
DNA (255bp) protein (85aa)
Transglycosylase-associated protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5I3_MESOW
transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:AEH86239.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
scnpilot_cont_500_p_scaffold_1027_6
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5106..5306)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5I2_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH86238.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium oppo
scnpilot_cont_500_p_scaffold_1027_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5416..6039)
DNA (624bp) protein (208aa)
3'-5' exonuclease n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Y1_9RHIZ rbh
3'-5' exonuclease {ECO:0000313|EMBL:EHH13216.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae
3'-5' exonuclease
scnpilot_cont_500_p_scaffold_1027_8
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6175..7560)
DNA (1386bp) protein (462aa)
UPI0003CE5493 related cluster n=1 Tax=unknown RepID=UPI0003CE5493 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY77754.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
peptidase M20 rbh
scnpilot_cont_500_p_scaffold_1027_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8060..9145)
DNA (1086bp) protein (362aa)
Probable lactose transport ATP-binding protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0L0_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZQ13059.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_1027_10
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9156..9983)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003788BC7 rbh
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJY47306.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophyti
scnpilot_cont_500_p_scaffold_1027_11
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9980..10852)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003754726 rbh
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AKI02659.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source
sugar ABC transporter permease
scnpilot_cont_500_p_scaffold_1027_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10872..12158)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000378DE0E rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM32712.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_1027_13
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12195..12932)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000303515C rbh
Uncharacterized protein {ECO:0000313|EMBL:EXL02346.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium deflu
hypothetical protein
scnpilot_cont_500_p_scaffold_1027_14
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12929..13666)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037F62CB
Transcriptional regulator {ECO:0000313|EMBL:AKI02662.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1027_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13728..15221)
DNA (1494bp) protein (498aa)
Xylulose kinase XylB {ECO:0000313|EMBL:EYR84479.1}; EC=2.7.1.17 {ECO:0000313|EMBL:EYR84479.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinell
Xylulose kinase XylB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG77_9RHIZ rbh
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_1027_16
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15297..16052)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000372A07A
Putative transcriptional regulator of N-acetylglucosamine utilization, GntR family {ECO:0000313|EMBL:KFC71116.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyp
HTH-type transcriptional repressor, GntR family
scnpilot_cont_500_p_scaffold_1027_17
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16358..19309
DNA (2952bp) protein (984aa)
UPI0003CE434E related cluster n=1 Tax=unknown RepID=UPI0003CE434E rbh
DNA polymerase I {ECO:0000313|EMBL:ESY77753.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC22
DNA polymerase I
scnpilot_cont_500_p_scaffold_1027_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19311..19940
DNA (630bp) protein (210aa)
Lysine exporter protein LysE/YggA n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Y4_9RHIZ rbh
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:CDX39175.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
Lysine exporter protein (LYSE/YGGA)
scnpilot_cont_500_p_scaffold_1027_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19987..20391)
DNA (405bp) protein (135aa)
Transcriptional regulator (Fur family) n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F0E8_9RHIZ
FUR family transcriptional regulator {ECO:0000313|EMBL:CDX43820.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
FUR family transcriptional regulator
scnpilot_cont_500_p_scaffold_1027_20
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20544..21590)
DNA (1047bp) protein (349aa)
UPI0003CF6E2D related cluster n=1 Tax=unknown RepID=UPI0003CF6E2D rbh
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:ESZ15569.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
aldo/keto reductase
scnpilot_cont_500_p_scaffold_1027_21
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21721..22863)
DNA (1143bp) protein (381aa)
UPI0003D04CC2 related cluster n=1 Tax=unknown RepID=UPI0003D04CC2 rbh
oxidoreductase domain-containing protein
Oxidoreductase {ECO:0000313|EMBL:ESZ24429.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A0
scnpilot_cont_500_p_scaffold_1027_22
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22875..23621)
DNA (747bp) protein (249aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMB2_9RHIZ rbh
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCV05303.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source
xylose isomerase domain-containing protein
scnpilot_cont_500_p_scaffold_1027_23
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23659..23946)
DNA (288bp) protein (96aa)
ABC transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Z8_9RHIZ
Glycerol-3-phosphate transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX43832.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyl
ABC transporter
Displaying 23 items

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