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scnpilot_cont_500_p_scaffold_1033

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1033_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23..1057
DNA (1035bp) protein (345aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
UPI0003CF1937 related cluster n=1 Tax=unknown RepID=UPI0003CF1937 rbh
scnpilot_cont_500_p_scaffold_1033_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1291..1632)
DNA (342bp) protein (114aa)
Alkylphosphonate utilization protein PhnA n=1 Tax=Nitratireductor indicus C115 RepID=K2NL17_9RHIZ
Alkylphosphonate utilization protein PhnA {ECO:0000313|EMBL:EKF40090.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" sourc
alkylphosphonate utilization operon protein PhnA
scnpilot_cont_500_p_scaffold_1033_3
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1695..2102)
DNA (408bp) protein (136aa)
Ribonuclease H family protein n=2 Tax=Mesorhizobium RepID=V7ERR5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX41652.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2260..3165
DNA (906bp) protein (302aa)
UPF0187 protein mll4386 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Y4386_RHILO rbh
hypothetical protein
UPF0187 protein mll4386; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobiu
scnpilot_cont_500_p_scaffold_1033_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3316..3726
DNA (411bp) protein (137aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00036CE837
Uncharacterized protein {ECO:0000313|EMBL:CDX22582.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3743..4270
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB61_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX52611.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4387..4650
DNA (264bp) protein (88aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FD89_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESW65587.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC28
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_8
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4824..5216)
DNA (393bp) protein (131aa)
UPI0003CE583B related cluster n=1 Tax=unknown RepID=UPI0003CE583B
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium lo
scnpilot_cont_500_p_scaffold_1033_9
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5287..5613)
DNA (327bp) protein (109aa)
Monofunctional chorismate mutase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDV0_MESAW
Chorismate mutase {ECO:0000313|EMBL:AID34643.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 76
monofunctional chorismate mutase
scnpilot_cont_500_p_scaffold_1033_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5625..7223)
DNA (1599bp) protein (533aa)
UPI0003CF0D07 related cluster n=1 Tax=unknown RepID=UPI0003CF0D07 rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
signal recognition particle protein
scnpilot_cont_500_p_scaffold_1033_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7518..8483)
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB55_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX40200.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_12
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8625..9227)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB54_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX25981.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_13
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9636..10436
DNA (801bp) protein (267aa)
UPI0003CF3288 related cluster n=1 Tax=unknown RepID=UPI0003CF3288 rbh
Murein transglycosylase {ECO:0000313|EMBL:ESY73152.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
transglycosylase
scnpilot_cont_500_p_scaffold_1033_14
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10483..10995)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YB61_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH85467.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
scnpilot_cont_500_p_scaffold_1033_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11037..11300)
DNA (264bp) protein (88aa)
UPI0003D04A9E related cluster n=1 Tax=unknown RepID=UPI0003D04A9E
Uncharacterized protein {ECO:0000313|EMBL:CDX41690.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11526..12749)
DNA (1224bp) protein (408aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase (EC:6.3.4.5)
UPI0003CE771B related cluster n=1 Tax=unknown RepID=UPI0003CE771B rbh
scnpilot_cont_500_p_scaffold_1033_17
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12997..15054
DNA (2058bp) protein (686aa)
diguanylate cyclase n=1 Tax=Rhizobium loti RepID=UPI0003764013 rbh
Diguanylate cyclase domain protein {ECO:0000313|EMBL:AID33355.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_1033_18
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15114..15755
DNA (642bp) protein (214aa)
Putative threonine efflux protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGH3_MESAW rbh
putative threonine efflux protein
Putative threonine efflux protein {ECO:0000313|EMBL:AGB43479.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
scnpilot_cont_500_p_scaffold_1033_19
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15727..16215)
DNA (489bp) protein (163aa)
UPI0003D007F4 related cluster n=1 Tax=unknown RepID=UPI0003D007F4
Uncharacterized protein {ECO:0000313|EMBL:ESZ06243.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_20
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16212..16658)
DNA (447bp) protein (149aa)
UPI0003CE7BC3 related cluster n=1 Tax=unknown RepID=UPI0003CE7BC3
Uncharacterized protein {ECO:0000313|EMBL:ESY73148.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16655..17890)
DNA (1236bp) protein (412aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YB67_MESOW rbh
radical SAM enzyme, Cfr family
scnpilot_cont_500_p_scaffold_1033_22
unknown

Not on your lists

18060..18389
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1033_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18405..19847)
DNA (1443bp) protein (481aa)
Efflux transporter n=1 Tax=Rhizobium loti RepID=M5AMT8_RHILI rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDX41715.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesor
drug resistance transporter, EmrB/QacA subfamily rbh
scnpilot_cont_500_p_scaffold_1033_24
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20186..20485
DNA (300bp) protein (100aa)
UPI0003CEDC08 related cluster n=1 Tax=unknown RepID=UPI0003CEDC08
Uncharacterized protein {ECO:0000313|EMBL:ESY90109.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1033_25
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20667..22019
DNA (1353bp) protein (451aa)
Chloride channel protein EriC n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHC6_MESAW rbh
chloride channel protein EriC
Chloride channel protein EriC {ECO:0000313|EMBL:AGB43473.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" s
scnpilot_cont_500_p_scaffold_1033_26
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22064..23392)
DNA (1329bp) protein (443aa)
diguanylate cyclase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0D0A rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABS69638.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xantho
scnpilot_cont_500_p_scaffold_1033_27
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23550..23834)
DNA (285bp) protein (95aa)
Signal peptide protein n=5 Tax=Mesorhizobium RepID=V7EUQ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX25964.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
invasion associated locus B family protein
Displaying 27 items

View Taxonomy