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scnpilot_cont_500_p_scaffold_1140

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1140_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)
Zinc metallopeptidase {ECO:0000313|EMBL:ESY69348.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L
scnpilot_cont_500_p_scaffold_1140_2
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249..719)
DNA (471bp) protein (157aa)
UPI0003D022D4 related cluster n=1 Tax=unknown RepID=UPI0003D022D4 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ27083.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
scnpilot_cont_500_p_scaffold_1140_3
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(837..1979)
DNA (1143bp) protein (381aa)
UPI0003CF754A related cluster n=1 Tax=unknown RepID=UPI0003CF754A rbh
Benzoate transporter {ECO:0000313|EMBL:ESY69350.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LN
benzoate transporter
scnpilot_cont_500_p_scaffold_1140_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1985..2764)
DNA (780bp) protein (260aa)
UPI0003CFE42B related cluster n=1 Tax=unknown RepID=UPI0003CFE42B rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX19312.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
scnpilot_cont_500_p_scaffold_1140_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3107..3511
DNA (405bp) protein (135aa)
translation initiation factor IF-3 n=1 Tax=Rhizobium loti RepID=UPI0001B73EFC
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
translation initiation factor IF-3
scnpilot_cont_500_p_scaffold_1140_6
unknown

Not on your lists

comp(3524..3745)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1140_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3832..4035
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=13 Tax=Mesorhizobium RepID=RL35_RHILO
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
50S ribosomal protein L35
scnpilot_cont_500_p_scaffold_1140_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4127..4528
DNA (402bp) protein (134aa)
UPI0003D05DCF related cluster n=1 Tax=unknown RepID=UPI0003D05DCF
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
50S ribosomal protein L20
scnpilot_cont_500_p_scaffold_1140_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4668..5765
DNA (1098bp) protein (366aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Rhizobium loti RepID=UPI000361C524 rbh
phenylalanyl-tRNA synthetase subunit alpha
scnpilot_cont_500_p_scaffold_1140_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5768..6418
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C2613
ASCH domain-containing protein {ECO:0000313|EMBL:EKF41687.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratir
ASCH domain-containing protein
scnpilot_cont_500_p_scaffold_1140_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6415..8823
DNA (2409bp) protein (803aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBC6_MESCW rbh
phenylalanyl-tRNA synthetase subunit beta rbh
scnpilot_cont_500_p_scaffold_1140_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8858..9460
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KEW2_MESAW rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX37471.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1140_13
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9611..10606)
DNA (996bp) protein (332aa)
Putative aldo-keto reductase 2 {ECO:0000313|EMBL:CDX18793.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDX18793.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EGM1_9RHIZ rbh
aldo/keto reductase rbh
scnpilot_cont_500_p_scaffold_1140_14
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10703..11602
DNA (900bp) protein (300aa)
UPI0003CF29CC related cluster n=1 Tax=unknown RepID=UPI0003CF29CC rbh
Transcriptional regulator {ECO:0000313|EMBL:ESY67818.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
transcriptional regulator rbh
scnpilot_cont_500_p_scaffold_1140_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11875..12468
DNA (594bp) protein (198aa)
cytochrome B n=1 Tax=Rhizobium loti RepID=UPI0003721553 rbh
Cytochrome B561 {ECO:0000313|EMBL:CDX19283.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;
cytochrome b561 rbh
scnpilot_cont_500_p_scaffold_1140_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12511..13086
DNA (576bp) protein (192aa)
Mll5048 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CQ6_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX19280.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_1140_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13397..14383
DNA (987bp) protein (329aa)
Oxidoreductase domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBC0_MESCW rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ADV09603.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
scnpilot_cont_500_p_scaffold_1140_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14450..16108
DNA (1659bp) protein (553aa)
KsdD-like steroid dehydrogenase MSMEG_5835 {ECO:0000313|EMBL:CDX34352.1}; EC=1.3.99.- {ECO:0000313|EMBL:CDX34352.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; P
UPI0003CEB6A1 related cluster n=1 Tax=unknown RepID=UPI0003CEB6A1 rbh
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein rbh
scnpilot_cont_500_p_scaffold_1140_19
unknown

Not on your lists

16310..16495
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1140_20
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16521..16736
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFV5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16187.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1140_21
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17146..18081
DNA (936bp) protein (312aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B8F32 rbh
dihydrodipicolinate synthase
scnpilot_cont_500_p_scaffold_1140_22
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18058..18372)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFW1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16192.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_1140_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18650..22525
DNA (3876bp) protein (1292aa)
Amino acid adenylation enzyme/thioester reductase family protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KKC5_MESAW rbh
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:CDX18924.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
amino acid adenylation enzyme/thioester reductase family protein
Displaying 23 items

View Taxonomy