ggKbase home page

scnpilot_cont_500_p_scaffold_1481

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1481_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..622)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLZ7_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10382.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice
scnpilot_cont_500_p_scaffold_1481_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(775..2166)
DNA (1392bp) protein (464aa)
Carboxy-terminal-processing protease {ECO:0000313|EMBL:CDX45407.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDX45407.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phy
carboxyl-terminal protease (EC:3.4.21.102) rbh
Carboxyl-terminal protease n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFI5_MESOW rbh
scnpilot_cont_500_p_scaffold_1481_3
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2108..3370)
DNA (1263bp) protein (421aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI0003665A60 rbh
membrane-bound metallopeptidase rbh
Membrane protein {ECO:0000313|EMBL:ESY98313.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC20
scnpilot_cont_500_p_scaffold_1481_4
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3518..4000)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
UPI0003CE234F related cluster n=1 Tax=unknown RepID=UPI0003CE234F
hypothetical protein
scnpilot_cont_500_p_scaffold_1481_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4137..4514)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FK70_9RHIZ
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesor
hypothetical protein
scnpilot_cont_500_p_scaffold_1481_6
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4769..5620
DNA (852bp) protein (284aa)
mechanosensitive ion channel protein n=1 Tax=Rhizobium loti RepID=UPI00035D387D rbh
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:AID33106.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_1481_7
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5653..6948)
DNA (1296bp) protein (432aa)
Arabinose efflux permease family protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGS2_MESAW rbh
arabinose efflux permease family protein rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGB43725.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="M
scnpilot_cont_500_p_scaffold_1481_8
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7080..7712)
DNA (633bp) protein (211aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
UPI0003CF9E8E related cluster n=1 Tax=unknown RepID=UPI0003CF9E8E rbh
nicotinate/nicotinamide nucleotide adenylyltransferase
scnpilot_cont_500_p_scaffold_1481_9
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7916..9202)
DNA (1287bp) protein (429aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
gamma-glutamyl phosphate reductase (EC:1.2.1.41) rbh
UPI0003CE8D4D related cluster n=1 Tax=unknown RepID=UPI0003CE8D4D rbh
scnpilot_cont_500_p_scaffold_1481_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9206..10345)
DNA (1140bp) protein (380aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
glutamate 5-kinase n=1 Tax=Rhizobium loti RepID=UPI00037BCF9B rbh
glutamate 5-kinase
scnpilot_cont_500_p_scaffold_1481_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10350..11381)
DNA (1032bp) protein (344aa)
GTPase Obg n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKQ0_9RHIZ rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteria
Obg family GTPase CgtA
scnpilot_cont_500_p_scaffold_1481_12
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11700..12563
DNA (864bp) protein (288aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EYS7_9RHIZ rbh
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:CCV04726.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
endonuclease/exonuclease/phosphatase rbh
scnpilot_cont_500_p_scaffold_1481_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12640..13227)
DNA (588bp) protein (196aa)
Acetyltransferase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EZ1_RHILO rbh
Acetyltransferase {ECO:0000313|EMBL:CDX25381.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS33
acetyltransferase
scnpilot_cont_500_p_scaffold_1481_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13347..13616)
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=2 Tax=Mesorhizobium RepID=M5EJ40_9RHIZ
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
rpmA; 50S ribosomal protein L27
scnpilot_cont_500_p_scaffold_1481_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13719..14324)
DNA (606bp) protein (202aa)
50S ribosomal protein L21 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=RL21_RHILO rbh
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
scnpilot_cont_500_p_scaffold_1481_16
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14855..16009)
DNA (1155bp) protein (385aa)
Sigma-70, region 4 family protein n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0AM82_BURTH rbh
sigma-70, region 4 family protein
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACQ98836.1}; TaxID=536230 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
scnpilot_cont_500_p_scaffold_1481_17
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16118..17230)
DNA (1113bp) protein (371aa)
Histone deacetylase superfamily n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBL0_9BURK rbh
Histone deacetylase {ECO:0000313|EMBL:GAN82006.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytic
histone deacetylase superfamily protein rbh
scnpilot_cont_500_p_scaffold_1481_18
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17249..18418)
DNA (1170bp) protein (390aa)
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TBL1_9BURK rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EDT39056.1}; Flags: Precursor;; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderi
major facilitator superfamily transporter
scnpilot_cont_500_p_scaffold_1481_19
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18677..19243)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WQ06_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN14785.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
hypothetical protein
scnpilot_cont_500_p_scaffold_1481_20
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19323..20321)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F090_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX23035.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
YadA domain-containing protein
scnpilot_cont_500_p_scaffold_1481_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20542..21138
DNA (597bp) protein (199aa)
Regulatory protein, TetR n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5H0_9RHIZ
Regulatory protein, TetR {ECO:0000313|EMBL:ENN88401.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
regulatory protein TetR
scnpilot_cont_500_p_scaffold_1481_22
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21169..22488
DNA (1320bp) protein (440aa)
PREDICTED: UDP-glucuronosyltransferase 3A1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19174 rbh
Glucosylltransferase 28 domain protein {ECO:0000313|EMBL:ENN88400.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi
glycosyl transferase family protein
scnpilot_cont_500_p_scaffold_1481_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22546..23391
DNA (846bp) protein (282aa)
Arylamine N-acetyltransferase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U731_9RHIZ rbh
Arylamine N-acetyltransferase protein {ECO:0000313|EMBL:ENN88399.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
N-acetyltransferase protein
scnpilot_cont_500_p_scaffold_1481_24
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23507..24703
DNA (1197bp) protein (399aa)
UPI0003D054B5 related cluster n=1 Tax=unknown RepID=UPI0003D054B5
Uncharacterized protein {ECO:0000313|EMBL:GAJ96594.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
nwsB; two-component response regulator protein (nodW mutant supressor protein)
scnpilot_cont_500_p_scaffold_1481_25
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24737..25933)
DNA (1197bp) protein (399aa)
Diguanylate cyclase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WWA9_OCHA4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EXL10219.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium deflu
diguanylate cyclase rbh
scnpilot_cont_500_p_scaffold_1481_26
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26092..26397
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4P6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KDP70787.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
antibiotic biosynthesis monooxygenase
scnpilot_cont_500_p_scaffold_1481_27
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26418..26732
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V4P6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX15399.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Ethyl tert-butyl ether degradation EthD
scnpilot_cont_500_p_scaffold_1481_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26830..27714
DNA (885bp) protein (295aa)
Putative esterase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2L4_9RHIZ rbh
Putative esterase {ECO:0000313|EMBL:ENN88065.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhi
putative esterase
Displaying 28 items

View Taxonomy